| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0290 |
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| Symbol | |
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| ID | 3903034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 336011 |
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| End bp | 337183 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877619 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_479406 |
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| Protein GI | 86739006 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.639758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.494925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCGC CGAACGCTGA TCCCGTAAAA GTGATCTGGC CGGTGCTGTT GGTCGAGGAT
GATGATGCCG ACGCCTATCT GGTGTCCGAG CTCCTCGACG AGGTCTCCGC TCCGGTCGAG
CTGACCCGGG TGCGCACGGT GGCCGAAGCC GCCCGTCGCA GCGAGCACGT CGCGTGCGTG
CTGCTGGATC TCGGGCTGCC GGACAGCGAG GGCCTGTCGG CGCTACGCCG GTTGCTCACG
GTCGAGGCGG GAGCGCCGGT CGTGGTGCTC ACCGGTCTGG TTGACGAGTA CCGGGGGGCG
CAGGCGGTCG CCGCGGGCGC GCAGGACTAT CTCGTCAAGG GTCAGGTCGA CGGGCGGGAC
CTGGTCCGGG CCGTCCGGTA CGCGATTGAG CGCAAGCGGG CCGACACCGC CGCGCAGGCG
CTGCGGGAGT CGGAGCTGCT GGCGGACGAG CGGGCCCGCC TCGAACGCGG CCTGTTACCC
CGGCCACTCA TCGACGACGG CCGGTTGCAT CACGACGCCC GGTACCGCCC CGGCCGGCAG
CAGTCCCTGC TCGGCGGGGA CTTCTACGAC ATGGTGTCCA CCGCGGACGG CACGCTCCAC
GTCCTGCTCG GCGACGTCTG CGGGCACGGC CCGGACGAGG CGGCGCTCGG GGTGAGCCTG
CGGATCGCGT GGCGCACGTT GGTCCTCGCC GGTGTTCCGG AACCCGACCG GCTCGGGTAT
CTCCAACGCG TGCTGGTGAG CGAGCGGGAA CAGGATGAGA TCTTCGCGAC GGTGTGCACC
CTCGCGATCG CTCCCGACCG GACCTCGGCG CGGATGCGGC TGGCCGGTCA TCCGCCGCCG
GCGCTGTTGC ATCCGCGGCT GTCGGCGCTG CCGGGCGACG TCGTCGGTCC GGCTCTTGGC
ATCGTCGACG ACGACCTCTC CGAGGAGGTG CGGATCGAGC TCGGGCCGCA CTGGGCGCTC
CTGCTCGCCA CGGACGGCCT GCTGGAGGGG CGGGAGGGAC CGGGCGGGGA ACCGCTGGGC
TGGGAGGGCG TGCTGCCCGA GATCGCCAAA CTCTGGCCCG CCGACGACCC CGACGGGCTG
CTCGACAACC TGATCGACCG GGTGGAGGCG CGCAATGGCG GCCCGCTGAC CGACGACGTC
GCGCTCCTGC TGCTGATCTG GGGTGCCGGC TGA
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| Protein sequence | MRAPNADPVK VIWPVLLVED DDADAYLVSE LLDEVSAPVE LTRVRTVAEA ARRSEHVACV
LLDLGLPDSE GLSALRRLLT VEAGAPVVVL TGLVDEYRGA QAVAAGAQDY LVKGQVDGRD
LVRAVRYAIE RKRADTAAQA LRESELLADE RARLERGLLP RPLIDDGRLH HDARYRPGRQ
QSLLGGDFYD MVSTADGTLH VLLGDVCGHG PDEAALGVSL RIAWRTLVLA GVPEPDRLGY
LQRVLVSERE QDEIFATVCT LAIAPDRTSA RMRLAGHPPP ALLHPRLSAL PGDVVGPALG
IVDDDLSEEV RIELGPHWAL LLATDGLLEG REGPGGEPLG WEGVLPEIAK LWPADDPDGL
LDNLIDRVEA RNGGPLTDDV ALLLLIWGAG
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