Gene Francci3_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0280 
Symbol 
ID3903023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp325516 
End bp326046 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content76% 
IMG OID637877609 
ProducttRNA-adenosine deaminase 
Protein accessionYP_479396 
Protein GI86738996 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CCGACGAGTA CCCCCGGGCG GGCGCTCCCG CCCGGCTGAG CGGTCCGCCC 
GGACCGGACC GCTTCCACGA GGCGATGGGG CTCGCCCTGC GCGAGGCCCG CCTGGCCCCG
GACCACGCCG ACGTCCCGGT GGGTGCCCTG GTGGTGACCG AGGACGGCAC GGTGCTCGGG
CTCGGGCACA ACGAGCGGGA ACGCGGCGCC GATCCCACCG CCCACGCCGA GATGATCGCC
CTGCGGGCGG CCGCGCGCCG GACGGGTTCC TGGCGGCTAC CGGGAGCCAC CCTCGTGGTC
ACGCTGGAGC CCTGCACCAT GTGCGCGGGG GCCCTCGTGC TCGCCCGGGT GGACCGCCTC
GTCTACGGCG CGGTTGACGA GAAGGCCGGG GCGGTCGGCT CGCTCTGGGA CGTGGTGCGG
GACCGGCGGC TCAATCATCG ACCCGAAGTG GTCGCCGGGA TCCGCGCCGA CGAGTGTGGC
GCCCTCCTGG CGGAGTTCTT CGCCGCGCGC CGGCGCCCGG CGGGGCGCTA G
 
Protein sequence
MTDPDEYPRA GAPARLSGPP GPDRFHEAMG LALREARLAP DHADVPVGAL VVTEDGTVLG 
LGHNERERGA DPTAHAEMIA LRAAARRTGS WRLPGATLVV TLEPCTMCAG ALVLARVDRL
VYGAVDEKAG AVGSLWDVVR DRRLNHRPEV VAGIRADECG ALLAEFFAAR RRPAGR