Gene Francci3_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0255 
Symbol 
ID3903663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp294788 
End bp295345 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content72% 
IMG OID637877583 
ProductCopY family transcriptional regulator 
Protein accessionYP_479372 
Protein GI86738972 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC TGGGTGACCT CGAACGGTCG GTCATGGACG TGTTGTGGGC GAGCGACGAC 
TGGCTGACCG CCCGCGAGGT CGCCGGCCGT CTCCAGCATG AACGCGATCT CGCGTACACC
ACCGTGCTGA CCGTGCTCGA ACGGTTGGAA CGGAAGGGAT TCGTGCGGCG TCAGCGTTCG
GCGCGCGCGC ATCGCTACGC GGCCAGCGAC AGTCGCGAGG CCGTCGTGGC CGAGGCGATG
ATGGAGGCGC TCGGCACGGC GGACGATCGT GGTTCCGCCC TGGTCCGCTT CGTGGGGTCG
GTGTCCGCGG AGGAGGCCGA GATCCTTCGC CGTGCCCTGG AACCCGTCGG TTCCGGGGCA
CCCGGCATCT TCGTGCCTGG CGCCGAGGCC CCGCGCGCCG AGGATCCGCA GGCCGAGGAT
CCGCACACGG AGGTCCGGCA CGCCGAGGCC CGGCGCGGTC CGGCGATCGG AGACCCGCCC
CGCGACGACC CGGAGCAGAT CGTCACGGTA GCCACCGACC CGGATCGAAC GGCCCAGATT
CCGCCCGACC ACCGGTAG
 
Protein sequence
MARLGDLERS VMDVLWASDD WLTAREVAGR LQHERDLAYT TVLTVLERLE RKGFVRRQRS 
ARAHRYAASD SREAVVAEAM MEALGTADDR GSALVRFVGS VSAEEAEILR RALEPVGSGA
PGIFVPGAEA PRAEDPQAED PHTEVRHAEA RRGPAIGDPP RDDPEQIVTV ATDPDRTAQI
PPDHR