| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0243 |
|---|
| Symbol | |
|---|
| ID | 3903651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 281268 |
|---|
| End bp | 283220 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637877571 |
|---|
| Product | heat shock protein 90 |
|---|
| Protein accession | YP_479360 |
|---|
| Protein GI | 86738960 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0326] Molecular chaperone, HSP90 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCC GGGTCGAGAC GCTGGAGTTT CAGGCCGAGG CGCGTCAGCT TCTGCAGCTG
ATGGTCCATT CGATCTACTC GAACAAGGAC ATCTTCCTGC GGGAGCTGAT CTCTAACGCG
TCCGATGCCC TGGACAAGCT GCGCATCGCG TCGTTGGTCA AGGACGGCCC GCGGGTCGAC
AGCGCCGACC TGCGCATCGA GATCGAGGCC GACGTCAACG CTCGCACTCT GACCGTCCGC
GACAACGGCA TCGGGATGTC CCGCGACGAG GTCGTCGGGC TCATCGGCAC CATCGCGAAG
TCCGGCACGG CCGAGCTGCT GCGCAAGCTG CGGGAATCCG AGGACGGCGC GGCGTCATCC
GATCTGATCG GGCAGTTCGG CGTCGGCTTC TACTCCACCT TCATGGTGGC CGACAAGGTC
ACCCTGCTGA CTGGGAAGGC CGGTGAGAGC GGCGGCACCC GGTGGGAGTC CGACGGCGCG
GGCACCTACG TCATCGAGAC GGTGGACGAC GCGCCGCGGG GAACCGCGGT CACGGTCCAC
CTGAAGCCCG AGGACAGCGA GGACCGTCTC TACGACTACA CCGACGAGAA CAAGATCCGG
GAGATCGTCA AGCGGTACTC CGACTTCATC GCCTGGCCCA TCCGGCTGGT GTCGGCCCCC
GCCGCGAAGG ACCGAGACTC GAACGACGAC GGGACAGCCG AGTCCGGCGC CGGCGCCGAG
AATGCCGGCG ACCGGCCGCT CAACTCGATG AAGGCGCTGT GGGCCCGGCC GCAGAGCGAG
GTCGACAAGG CCGAGTACGA CCAGTTCTAC CAGCACCTCA GCCATGACTG GACCGGCCCG
CTCGAGGTCA TCCACATGAA GGGCGAGGGG ACGTTCGAGT ACGAGGCCCT GTTGTTCATC
CCGTCGCGAG CGCCGCTCGA CCTGTTCACC CGGGATGCAC GCCGCGGCGT CCAGCTGTAT
GTGAAGCGCG TGTTCATCAT GGATGACTGT GCGGAGCTCC TGCCGAACTA TCTGCGCTTC
GTCCGGGGCG TCGTCGACAC GCACGACCTG TCGCTCAACA TCTCCCGAGA GATCCTCCAG
CAGGACCGCC GGATCCAACT TGTGCGGCGC CGGCTGGTCA AGAAGATACT GGCCTCCATC
AGGGCTCTTC AGGAGAACGA CGCCGAGCGC TACCGCACGC TGTGGAAGGA GTTCGGCGCC
GCCCTCAAGG AGGGCCTCCT CGAGGATGCC GACAACCAGG ATGCGATCCT CGGCCTCGTC
TCGGTGGACT CGACGCACGA CGCCGATCGG CCGACCACGC TGCGCGAGTA CATCGAGCGT
ATGAAGGACG CCCAGAACGA GATCTACTAC CTGACCGGCG ATTCGCGCGG AATGATCGAG
AACTCGCCGC ACATGGAGGC GTTCCGGGCC AAGGGCTACG AGGTCCTGAT CCTGACCGAC
CCGGTTGACG AGGTCTGGGT CGAACGGGTG GCGGAGTTCG ACGGCAAGCC GCTGAAGTCG
ATCGCGAAGG GCGAAGTCGA CCTCGACACC GACGACGAGA AGAAGAGCAG CGAGGCCGAG
CGGGAACAGC TGCGCAAGGA CTTCGCCGCC CTACTGCCCT GGCTGGCGGC CAAGCTTGAG
GACGACGTCA AGGAGGTCCG GCTGTCCAGC CGCCTCACCA CGTCGCCGGC CTGCCTCGTC
GGCGACACGT TCGACATGAC GCCCGCGCTG GAGAAGATGT ACCGGGCGAT GGGGCACGAG
ATGCCACGCC CCAAGCGCAT CCTCGAACTC AACCCGACGC ACGCGCTGGT CATGGGCCTG
CGCGCCGCAC ACGAACGGGA CGCGGATTCC GCCGCCCTCG GCGACACCGC GGAGCTGCTG
TACGGCATGG CGCTGCTCGC CGAAGGCGGA GAACTGCGCG ATCCCGCGCG ATTCACCCGC
CTCCTCGCCG AACGCCTGGC GGAGGCGCTG TAG
|
|---|
| Protein sequence | MSTRVETLEF QAEARQLLQL MVHSIYSNKD IFLRELISNA SDALDKLRIA SLVKDGPRVD
SADLRIEIEA DVNARTLTVR DNGIGMSRDE VVGLIGTIAK SGTAELLRKL RESEDGAASS
DLIGQFGVGF YSTFMVADKV TLLTGKAGES GGTRWESDGA GTYVIETVDD APRGTAVTVH
LKPEDSEDRL YDYTDENKIR EIVKRYSDFI AWPIRLVSAP AAKDRDSNDD GTAESGAGAE
NAGDRPLNSM KALWARPQSE VDKAEYDQFY QHLSHDWTGP LEVIHMKGEG TFEYEALLFI
PSRAPLDLFT RDARRGVQLY VKRVFIMDDC AELLPNYLRF VRGVVDTHDL SLNISREILQ
QDRRIQLVRR RLVKKILASI RALQENDAER YRTLWKEFGA ALKEGLLEDA DNQDAILGLV
SVDSTHDADR PTTLREYIER MKDAQNEIYY LTGDSRGMIE NSPHMEAFRA KGYEVLILTD
PVDEVWVERV AEFDGKPLKS IAKGEVDLDT DDEKKSSEAE REQLRKDFAA LLPWLAAKLE
DDVKEVRLSS RLTTSPACLV GDTFDMTPAL EKMYRAMGHE MPRPKRILEL NPTHALVMGL
RAAHERDADS AALGDTAELL YGMALLAEGG ELRDPARFTR LLAERLAEAL
|
|---|
| |