Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1575 |
Symbol | |
ID | 5451626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1716446 |
End bp | 1717855 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640875350 |
Product | membrane protein-like protein |
Protein accession | YP_001411075 |
Protein GI | 154250250 |
COG category | [S] Function unknown |
COG ID | [COG4267] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGGA TAGGATTTGA ATTAAACAAA CTGTTAAAAC GAAATTCTTT TTTCTCGGAA GCTGTCGCAT TCTTTTATTC TGCAAATATA TCTGCAGGAC CATGGATAAT ATCTTCGTTG ACACTTTTTC TAATACAAGT TTATATACCT CAACAGAATA TTCCATTCCT AGTCTCAGGA ATTATTTATA CTTTCATTTT TTCAACAATA CTTTTTGGAA GCGTTGCAAC TTCCGTTACA CGTTATTTAT CTGATTTGAT TTATAAGAAG GAATTTAATA ATATATATAA ACTTTACACT TCGTTGGTTG GTTATGCGTT TATATCTTCT GGGATATTTC TTACCTTGTT CTTCCTTATC AACAAAATTT CTGAGTGGCA AAAAATTATT CTTTTTTCAT ATTCTTTGAT TGTTCTTTCG ATAATTTGGG TTCAAGTCAT TTTTATATCC GCTATTAGAA AATTTTCTCC CGTTATTCTA AGTTTTTTAT TCGGTGGTAC TGCTGGTTTC TTTTTAACTT TGTACCTTTA TAAAACCAAA AATGAATATT ATGCTTACGC AGGTTACAAT TTTGGTTTAA TGATTATACT TACAATTCTT CAACTTTACA TTCGAAGATA TCTTTATTTA GGAGAAGAGG TGGAAAAAGA ACAAAAAAAT ATTAATCCTC CGCTTTTTAT ACTCTCGATT AAGGCATACA AAAAACAGGC ACTATCAGGT TTTTTTACTT ATATGGCTGC TTGGGTTGAT GATTTTATCG CTTGGATTTA TTTCAGATAC AGTATTTCAA AAGGTTTTGT ATTTGCGCCC CAGTATGATA TTCCAATGTT TATCTCATAC CTTTTTATAA TTCCAACCTT GTCACTTTTC GTTCTAAACT TGGAAACGGA ATTTTATTTT TACTATAGAG CTTTTTACAA ATCTATCGAA GAAAATCGCA CTTTGAACTT TATAAGGATA AGTAAAAATA ATTTAGACGA AAGTCTTTAT TCTTCAACTA AACTTGTATT AGCGGTTCAA TTTTCATTTA TGTTAACTGG TCTTATTCTT TCTGATAGTT TAGCTGATTT GTTGAGGCTT GATAGCTACG GCTCAACGGC TTTAAAATTT GGTATTGTTG GTGCTGCTGC AAATGGAATT TATCTTTACA TTTCTTTGAT AGCGCATTAC TTTGACTTGC CTGGTATACC ACTTAAATCT TCTATAATGG CCTTTTTGAT TAATTTATTT TTATCACCAC TCACTGTCAA GCGTTTGCCT GGAATCGGTT TTGTCATTGG TTTTATTTTT GCCACGATAT ACAGTTTTAT TAGATTTAAT CGCATTTATT CTAATTTGCT CATGTTTGAG TTTTCAAGAA ACAGGCTGAA ACTTCCGAAG GTAGGGGTTA TAATTCATGA AAACAAATAA
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Protein sequence | MAGIGFELNK LLKRNSFFSE AVAFFYSANI SAGPWIISSL TLFLIQVYIP QQNIPFLVSG IIYTFIFSTI LFGSVATSVT RYLSDLIYKK EFNNIYKLYT SLVGYAFISS GIFLTLFFLI NKISEWQKII LFSYSLIVLS IIWVQVIFIS AIRKFSPVIL SFLFGGTAGF FLTLYLYKTK NEYYAYAGYN FGLMIILTIL QLYIRRYLYL GEEVEKEQKN INPPLFILSI KAYKKQALSG FFTYMAAWVD DFIAWIYFRY SISKGFVFAP QYDIPMFISY LFIIPTLSLF VLNLETEFYF YYRAFYKSIE ENRTLNFIRI SKNNLDESLY SSTKLVLAVQ FSFMLTGLIL SDSLADLLRL DSYGSTALKF GIVGAAANGI YLYISLIAHY FDLPGIPLKS SIMAFLINLF LSPLTVKRLP GIGFVIGFIF ATIYSFIRFN RIYSNLLMFE FSRNRLKLPK VGVIIHENK
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