Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1541 |
Symbol | |
ID | 5451835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1672108 |
End bp | 1674165 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640875314 |
Product | translation elongation factor G |
Protein accession | YP_001411041 |
Protein GI | 154250216 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTGCGA AGGATAAACG CACAGTAGTG CTTGTAGGGC ATAACGGTTC CGGTAAATCT GCTTTAATGG TTAGCGCGTT AAACCTCGGA GGTTTTAACG TAACAAAAAA AGATATCGAT TCAGATCCTA TTGAAGTCCA AAGAGGAGCA AGTATTAACT CGCATGTTGG AACATTTAAA TACGAAGGCA AACAAATTAC ATTGATTGAT ACACCGGGTT TCAGTGATTT TATAGGTGAA GTTATAAGCG CGGTATTTGT TTCAGAAAAC GTTCTAAGTG TTGTAAACGC AACAGCTGGC GTTGAAATTC AAACAGAAAG AACATGGGCT CTAGCAAATG AAATGGAAAA GCCCATTATG GTTTTTGTCA ACCAAATGGA TAAAGAAAGA GCAAGCTTTG ATAATTCCAT TGCTTCATTG AAAGAAAGAT TTGAAGCTAA AATAGTTCCA GTTGTTTACC CAATAGGTCA AGAAGCAAGT TTTAAAGGTA TCGTTGACTT ACTATCAGGA AAAGCCTATA TATATGAAAA TGGAAAGGCC AAAGAAACAG ATATCCCTGC AGATTTGAAA GACAAAGTAG AAGAAGTTAA AATGTCAATA ATGGAAGACA TTGTCTCTCT TGACGATGCG TTGATGGAAA AATATTTTGC AGAAGAACCA ATATCTGCGG AAGAGCTTTG GAATGCTTTG AGAAAAGGTT TTATTGAAAG ACAAATTGTA CCTATCTTCG CAGGTTCAGC TGAGAAAAAC ATAGGAGTTG ATTTCTTACT TAAAGCGATT AACGCACTAG GTGCATCACC TCTTGAAGTC AAACCTTACA AAGCGAAATT GGAAAGTGGC GATGAAGTAG AAATAATTCC ATCGGAAACA GATCCGCTTG TAGGATACAC ATTTAAAGCG GTTGTTGACC CATTTGTTGG TAAGTTGAGT TTTATTAAAA TAATATCTGG AAATATGAAA CCTGGAGATG CATTCAACAA CGTTACAAGA GGGACTCAAG AAAAAGCAGG CCACTTATAC TTTGCAAAAG GTAAGGAAAC ATATGAAATA GAAGAAGTCT CATGTGGTGA TATCGTTGTT CTTCCAAAAT TAAAGGATAG CGGAGTTAAA GACACAATAA CACACAAAGA TAGAAAACTT ACGATAATTT CTCCAGAATA TCCAGAACCA ATGATTTCAA AGAGTGTCAA TCCAAAATCA AAGTCAGATA TAGATAAAAT CAGTAACGGT CTTAGCAGAC TTGCCGATTC AGACCCAACG TTTGCATGGG AATTTGACCC AGAAACATCC GAAACTGTTA TTTCAGGTAT CGGTGGAATG CACCTTGACG TAATGGTTGA AAGATTGAAG AACATATTTG GTGTCGATGT CGAAGTTGGT AAACCAAAGA TAGCATACAG AGAAACAATT TTAGGTAGAG CGGAATCCGA ACACAAACAC AAAAAACAAT CTGGTGGACA TGGTCAATAC GGACACGTAA AAATATTGCT CGAACCAGCT GAAAGAGGAA CCGGTTTTGA ATTTGTTGAT AAGATCGTTG GTGGAGTTAT ACCAAGAAAC TTTATTCCAT CCGTTGAAAA AGGTATTAGA GAAGCTATGA AGAAAGGTGT ATTGGCGGCT TACCCTGTCG TCGATGTCAG AGTTACACTC TTCGATGGTT CATACCACGA AGTTGACTCT TCAGATATTT CATTCCAAAT TGCCGCTATA CAAGCTTTCA AAAAAGGTAT GCAACAAGCA AAGCCTGTTT TACTTGAACC TGTGATGTAC GTAGAAGTAT TTACACCAGA TGAAAATGCG GGAGATGTCA TGGGCGATAT CAGCTCAAGA AGAGGAAGAC CTATGGGAAT GGAACCTGCG GGTAAAGGTA TTACCGTTGT AAAAGCAGAA GTACCACTTG CGGAAATGTT AGATTTCCAA GGAAGGCTTT CATCAATAAC AAGTGGTAGA GGATACTTTA CTATGAAATT TGAAAAGTAC GACGTTGTTC CACCAAATAT CCAAGAAAAA ATTATAGCCG AACGTAAGAA ATATCTTGAA GAACAAGCTG AAGAATAA
|
Protein sequence | MVAKDKRTVV LVGHNGSGKS ALMVSALNLG GFNVTKKDID SDPIEVQRGA SINSHVGTFK YEGKQITLID TPGFSDFIGE VISAVFVSEN VLSVVNATAG VEIQTERTWA LANEMEKPIM VFVNQMDKER ASFDNSIASL KERFEAKIVP VVYPIGQEAS FKGIVDLLSG KAYIYENGKA KETDIPADLK DKVEEVKMSI MEDIVSLDDA LMEKYFAEEP ISAEELWNAL RKGFIERQIV PIFAGSAEKN IGVDFLLKAI NALGASPLEV KPYKAKLESG DEVEIIPSET DPLVGYTFKA VVDPFVGKLS FIKIISGNMK PGDAFNNVTR GTQEKAGHLY FAKGKETYEI EEVSCGDIVV LPKLKDSGVK DTITHKDRKL TIISPEYPEP MISKSVNPKS KSDIDKISNG LSRLADSDPT FAWEFDPETS ETVISGIGGM HLDVMVERLK NIFGVDVEVG KPKIAYRETI LGRAESEHKH KKQSGGHGQY GHVKILLEPA ERGTGFEFVD KIVGGVIPRN FIPSVEKGIR EAMKKGVLAA YPVVDVRVTL FDGSYHEVDS SDISFQIAAI QAFKKGMQQA KPVLLEPVMY VEVFTPDENA GDVMGDISSR RGRPMGMEPA GKGITVVKAE VPLAEMLDFQ GRLSSITSGR GYFTMKFEKY DVVPPNIQEK IIAERKKYLE EQAEE
|
| |