Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1406 |
Symbol | |
ID | 5452768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1521289 |
End bp | 1523835 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640875181 |
Product | type III restriction protein res subunit |
Protein accession | YP_001410909 |
Protein GI | 154250084 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAAG ACAGTCGGAA ATTTAGACAA CCTTATTCAA CAAAAAGCCT GCTTCCATCG TGTTTCATCG GAGGAAACGA TTTGTTTTTG AAAGAAATCA GCGAGACTAT ATTAAAGGCT ATTGAGATAG ATATAATTGT TTCGTTTGTT CTCAAATCAG GTGTTGAGTT GTTGCTTGAA CCGTTAAAGA AAGCAAGTTC AAATAGTGCA AAAGTGCGGG TGTTAACGAG TACTTATTTG AATATAACCG AACCTTCCGC ACTTGTTCTC TTGAAAGATT CTCTTGGTGA CAATTTAGAT TTGCGGGTCT TTAAGTATGA AGATAAACAT TTTCATCCGA AAGCGTATAT TTTTGAGTTC ACAAATGGCG ATGGAGAGCT CTTCGTTGGG TCTTCAAATA TTTCCAAGGA TGCTCTGACT GGTGGTATAG AGTGGAATTA TAGAATTTCA AAAAGCGCAA ATCCTGAACA TTTTGAGTAT TTCAAGAAAG CTTTCTTTGA CTTGTTTGAA AATCACAGCG TCTTAGTCGA TGATAAGTTC ATCGAGCAAT ATGCTGAAAA GTGGGCAGCC AAAAAGTCTG ACTCCGAGTA TGAAGGTTTG AAAAATTTGG AAAAGGATAT TTACGTTTTT GAGTCGGATG AATGTGAAAC TAATTTGGAG GAAATGGAAG GTATTGAACA AAGTAAGTCT GAGCTGTCCA ATTTACCCAT CATTCCTAAC GAGGTTCAGC AGGAAGTTTT GAGGGAGTTG AATAATACAA GAGCAGAAGG ATTCACAAAA GCGCTTGTCG TTTTGGCTAC AGGGGTTGGG AAGACTTTCC TCGCAGCATT TGATTCTATG CAATTCAACA GAGTTTTTTT CATTGCACAC AGAGAGGAGA TACTAAAACA AGCGAAGAGC ACGTTTGAGA AAGTACGCCC AACATCTCGC ATGGGCTTTT TCACCTCTTC AGGGAAAGAT ACAGATGCTG ATATCGTTTT TGCTTCTGTG TTCACAATTG GCAAAGAAGA ATATCTGAAC GATGATTACT TCCCGCCGGA CTATTTTGAC TACATAATAA TTGACGAGTT CCACCATGCT GCGGCTGAGA GTTACAAAAA GCTCTTGAGT TATTTCAATC CTAAGTTCTT GCTTGGCCTT ACTGCAACAC CTGAAAGAAT GGATGGTAAG GATGTATTCG AAATATGCGA CTACAACGTT GTGTATGATT TAAGGCTACC GGATGCCATT AATAGAGGAT ACTTAGTTCC TTTCCACTAT TACGGAATCT ATGATGAAAC CGACTTTTCA AAGATTCCAA TTATAGACGG TCATTACAAA GAAGACGAGC TTGAAAAAGC ATTAATGCTC CATAAAAGAG CTGATTTAGT GTTGCAAAAG TATGTAAAAT ATGGTAGAAA GCGGGCAATA GGTTTTTGCG TTTCTCGAAA CCATGCCGAA TACATGGCTG ATTACTTTAA CAAGAACGGT GTAAATGCAT GTGCCGTTTA CAGCGGTGAA CAAGGTAGAA ATGCTCTTCC AAGATGGGAA GCTATAGAAA AACTCAAAAA TAGAGAAATA GATGTGATTT TCACCGTAGA CGTCTTCAAT GAAGGTGTCG ATATTCCTGA GATAGAAATG GTCATGTTCC TAAGACCTAC AGAATCTACT ACCGTTTTCA TCCAGCAACT TGGGAGAGGT TTGAGAAAAG CTAAAGGTAA GAAATACTTG ATAGTGCTCG ATTTTATAGG CAACTATAAG AATGCTGTTC TTGTTCCGTT TATACTTACA CAGAAAGAGT ACGATATTAG CTTGCTGAGA AGAGAACTTG ATACAAAAAA ACTAAGCGAA GTACTGGAAC TCCCCAAAGG TTGCGAAGTT GAATTTGAAT TCAAAGTTGT TGACCTCATT AGGAAGATGG CAAAAGAATT GCAGCAGATA GAAGAAATCA TCTTTAACGA GTATCTTAGA ATAAAGGAAT TCTTGGGTCA CAAGCCTTTG AGGCACGAGT TCTATAAATA TGTAGAAAAA GTTGTATATA ACAACATACG TAGAAACTCG AAACTGAACA TCCTGAGAGA TTATATTGCG TTTCTTAACA ACCACGGAGA GCTCGATGAA AATGAAAGAG CTATTTGCAA TACTATTGCT CATAGGTTTA TAAACTTCAT AGAGACTACT AATATGACAA AAAGTTATAA AATGCCAGTT TTACTTGCGT TTTATAACAA TGGAAACCCG AAATTATGCG TAACTTCAGA TGATATTTAT ATGAGCTTTA AGGAATTTTA TTCCAATCCA TCCAATGCTG TCGACTTAAA AATGCACAGC TCCACGAGAG ATTTTGAAAC ATGGGGAAAA GATGAATGGG TGAAGCTTTC AAGAAAGACC CCTGAGCATT TTCTTGAGCA AACACACGGA GAATTCTTCA AGAGAAAAGG TGAGCTGTTT TGCCTGAATG AAGAACTTGC GAGGTTCTTT AATAATAAAG CATTTATAGA ACACTTTAGA GATGCAATTG AGTACAGGAC AATAAGGTAC TACAAGGAGA GGATAAAGCA TGGATAG
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Protein sequence | MVEDSRKFRQ PYSTKSLLPS CFIGGNDLFL KEISETILKA IEIDIIVSFV LKSGVELLLE PLKKASSNSA KVRVLTSTYL NITEPSALVL LKDSLGDNLD LRVFKYEDKH FHPKAYIFEF TNGDGELFVG SSNISKDALT GGIEWNYRIS KSANPEHFEY FKKAFFDLFE NHSVLVDDKF IEQYAEKWAA KKSDSEYEGL KNLEKDIYVF ESDECETNLE EMEGIEQSKS ELSNLPIIPN EVQQEVLREL NNTRAEGFTK ALVVLATGVG KTFLAAFDSM QFNRVFFIAH REEILKQAKS TFEKVRPTSR MGFFTSSGKD TDADIVFASV FTIGKEEYLN DDYFPPDYFD YIIIDEFHHA AAESYKKLLS YFNPKFLLGL TATPERMDGK DVFEICDYNV VYDLRLPDAI NRGYLVPFHY YGIYDETDFS KIPIIDGHYK EDELEKALML HKRADLVLQK YVKYGRKRAI GFCVSRNHAE YMADYFNKNG VNACAVYSGE QGRNALPRWE AIEKLKNREI DVIFTVDVFN EGVDIPEIEM VMFLRPTEST TVFIQQLGRG LRKAKGKKYL IVLDFIGNYK NAVLVPFILT QKEYDISLLR RELDTKKLSE VLELPKGCEV EFEFKVVDLI RKMAKELQQI EEIIFNEYLR IKEFLGHKPL RHEFYKYVEK VVYNNIRRNS KLNILRDYIA FLNNHGELDE NERAICNTIA HRFINFIETT NMTKSYKMPV LLAFYNNGNP KLCVTSDDIY MSFKEFYSNP SNAVDLKMHS STRDFETWGK DEWVKLSRKT PEHFLEQTHG EFFKRKGELF CLNEELARFF NNKAFIEHFR DAIEYRTIRY YKERIKHG
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