Gene Fnod_1363 details

Gene Information

• Locus tag: Fnod_1363
• ID: 5453103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1470972
• End bp: 1474346
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640875139
• Product: reverse gyrase
• Protein accession: YP_001410867
• Protein GI: 154250042
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1110] Reverse gyrase
• TIGRFAM ID: [TIGR01054] reverse gyrase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGAAG CCATATTTAA GAACCTTTGT CCAAATTGCG GGGGAGATAT AACTTCTGAG 
AGATTGTTGA ATGGTTTACT TTGCGAAAAA TGCTTGCCCC AACAAGTTTC AAAAGAATTT 
TTGTGTGAAC ACATAAAAGA AGAAAAATAT GATTTGTGCT CTTTAAAGGA AAGGTACAAT 
GATTGGGAAA AGGTATTTAG AAAATTTATT GGATTTGATC CTTGGGAACT TCAGAAATTC 
TGGGCTAGAA AATTACTCTT AGGAAGGTCA TTTGCACTAC TTGCCCCCAC GGGAATAGGT 
AAAACTTCGT GGGGGCTCGC TACTGCTTTA TATTTTTCCA AAAAAGGTAA AAGATCGTAC 
ATAATATTAC CTACAAAACT TCTCATTCTT CAAAGCTATG AGAAATTGAA AGATAAAGTT 
AAAGAATCTG ATTTACTTGT TTTTGGGCTT GATGAGAGCA ATAAAGAAAG AGAAGAAAAG 
AAAAAAAGAT TGGCTAATGG TGATTTCAAA ATACTAATCA CCTCTTCGAT GTTTCTTTAT 
AAAAATGTTG ACCTCATCCC CAAGGATTTC GCTTTTATTT TTGTAGATGA TGTTGATTCG 
TTCTTGAAGA CGGCAAAAAA TATCGATAAA GCGCTGTATC TTTTAGGATT TGACGAGAAA 
GACATAAGTT TTACAATGAA TTACATAAAA ATGAAGAGAA CGCAAGCGAA TGAAGAGAAA 
GTAAAAGCAA TGCAAGAAGA AGTAAGAAAA ATTGCAAGCA AAGCTAAGGG AGTAATGGTG 
GTAGCGTCCG CAACTAGTGA CCCAAAATCC GAGAGAATAA GATTATTCAA AGAACTCTTA 
TCTTTTGATG TTGGCAGACC TATATTCTAT TTAAGAAATG TGGAAGACGT TTACGAAGAA 
GTAGAAAATC TTGACGATGC ACTTGTTAGA ACAGTAAAAA GATTAGGGAA AGGTGGTCTT 
GTATTTCTTT CGTCTGATTT TGGAAAAGAA CGTGTAGATT ACATTAAAAA CTTACTTGAG 
AGTAACGGGA TAAAAACCGA GACATACGAA AACTTGTCTC CAGAAGTTTT AGAAAAATAC 
AGAAAAGGTG AGATAGAAGT TCTTATCGGT ATATCTTCTT ACAGGAATCC TTTGGCAAGG 
GGATTAGATA TGCCAGAGGT TATAAGGTAC GCGGTTTTTT ACGGCGTACC TAAAATTGTT 
GTTAATCTTG ATATCGAAGG TAATGTAAAG CACCTTTTAC TCGCACTTTC TTCCATAAGA 
CCGCTTATCG CAAGGGATAA GGACTTAGAG GAAAAAGTTT CCCTTGTAGA TAAATGGATG 
AAAGCGTTGA AGAAATTTTC TTCAATGCCA AATCCTCCTG TTGATAAAGT TAACGAGCTA 
AAAAACGAAA TAAAAAATTT CATACTTTCG AAAGAAATAC ACGAGAAAAT AAGTAATTCA 
GATGAAGTTG TTTTAAGGCA AGAAGATGAA AAGTGGATAC TAGTTGTTTC AGATATAACA 
GGATATCTCC AAGCTTCTGG AAGGACTTCA AGACTTTACG TTGGTGGAAT TTCAAAAGGA 
TTAAGTTATA TTCTTGTTGA CGACAAAAAG GTTTTGAACA ACCTATTAAA GAAAAGTAGA 
TGGTGGTTCA GTACAGATAT TACATTTAAA GAAGCTCGTA GCATTAACAT AGATGAAATT 
TTAAGACAAA TCGACGAGGA CAGAGAAAAA GTTAGGAGGA AAGAAGGTAG ACGAGACGAT 
TTCTTAAAGC CTGTATTAGT CATAGTAGAA TCACCTCACA AAGCTTGGAC CATTGCAAAC 
TTCTTTGGAA AACCAATCTC AAGAAATGTG AATGGTCAAG AACTCTATGA GGTAATAACC 
GAAGATAAAT ACCTAGTGAT AACAGCTTCG TTTGGTCATG TGTTGGACTT GAACAAGGAA 
ATAGGGTATT TTGGCGTTAT CGAGAAAGAA AAATTCATAC CCGTGTATGA ACCTATAGAT 
AAAAAAGAAA GAATGATTGA AGGAATAAGA GACGCCAGCA AAGAATTCGA TATGATACTT 
GTGGCAACGG ACCCTGATAC AGAAGGAGAG AAAATCTCTT GGGACTTAAA AAATCTGTGT 
ACACCTTTTG TGAAAGAAAT CAGGAGAATG GAATTCCACG AAATAACCAA AAAAGCCATA 
CTCAACGCAC TTAAAGAATC AAGGAATGTT AATGAAAACC TTGTGAAAGC TCAGGTCGTA 
AGGCGGATAT CCGATAGATG GGTCGGTTTC GAACTTTCCC AGCTTATCCA GAAAGTCTTT 
TCAAAAAGCT CACTTTCCGC GGGGAGAGTA CAGACCCCTG TCTTGGGTTG GGTTATAGAA 
AGAGCGAAAG AAAATCGGAA AAAGATACAT ATTGTTTCTG TAAAAAGATA CGGGCTTGAT 
ATAAAGTTTG AATTTGAAGA CAAGCAAAAA GCTCAGAAAT TTTACAATGG CCTAAAGTAC 
ATTCAGATAA ACAAAAGTTC GGAAAAAATC CAAGAAAAAT CACCGCTTCC ACCTTACACA 
ACAGATGCGC TATTGAAAGA CGCTTCCGAA AAATACAAAA TTTCCGTTTC AAGAACGATG 
GAAATACTCC AAGAATTGTT CGAAAGAGGA TTCATCACAT ACCATCGTAC AGACTCTACG 
AGAGTATCAG ATGTTGGAAT AAGCGTTGCA AAAAGTTATA TAGCTGAACA ATTTGGTGAA 
GAATATTTCA AAGGAAGAAC ATGGGGCGAA GGTGGAGCGC ACGAATGCAT AAGACCAACA 
AGAGTACTTG ATGTCGAAGA TATAAAATCG ATGATCTACT CAGGCGAACT TGAAGATTTT 
ACGCCAGATC ACCTGAAAAT TTATGATTTA ATATTCAAAA GATTCATATC ATCTCAAATG 
AGAAATGTTG TAGTTAAAAG TTGTGATATT ACAGTCAAAG CCTTCGACAA AGAGCAGACA 
TTTGAAATAT ATGAAGAAAT CATCCAAGAA GGTTACAACA AAATATTCCC AATCAAACTT 
ACGAAAATAC CTACTGGGGA AGTTGTTGTG GTGAATTATA AATCCTTCTA CAGCGTTCCG 
AAAGTACCTT TATTCACGCA AGGTACACTC GTAGAAGAGA TGAAAAAACG TGGTCTTGGA 
AGACCATCTA CGTATGCCAC AATTGTAAGT CGATTACTTG AGAGAGGATA CGTCGTAGAA 
AAAGAAGGAT ACCTGATACC GACACCGCTA GGTGAGAAAG TGTACAAATT CTTAAACTCC 
AGTCCAGAGA AATTTAAATT TGTAAGAGAA GACTTTACAA GAGAACTTGA ACAACTTATG 
GACAAAGTAG AACTTGGCGA AGAAGATTAC CAAAAGATAC TTAAAAATCT AAAAATGGAA 
ATTGAGAGAA TTTGA 

 

Protein sequence

MIEAIFKNLC PNCGGDITSE RLLNGLLCEK CLPQQVSKEF LCEHIKEEKY DLCSLKERYN 
DWEKVFRKFI GFDPWELQKF WARKLLLGRS FALLAPTGIG KTSWGLATAL YFSKKGKRSY 
IILPTKLLIL QSYEKLKDKV KESDLLVFGL DESNKEREEK KKRLANGDFK ILITSSMFLY 
KNVDLIPKDF AFIFVDDVDS FLKTAKNIDK ALYLLGFDEK DISFTMNYIK MKRTQANEEK 
VKAMQEEVRK IASKAKGVMV VASATSDPKS ERIRLFKELL SFDVGRPIFY LRNVEDVYEE 
VENLDDALVR TVKRLGKGGL VFLSSDFGKE RVDYIKNLLE SNGIKTETYE NLSPEVLEKY 
RKGEIEVLIG ISSYRNPLAR GLDMPEVIRY AVFYGVPKIV VNLDIEGNVK HLLLALSSIR 
PLIARDKDLE EKVSLVDKWM KALKKFSSMP NPPVDKVNEL KNEIKNFILS KEIHEKISNS 
DEVVLRQEDE KWILVVSDIT GYLQASGRTS RLYVGGISKG LSYILVDDKK VLNNLLKKSR 
WWFSTDITFK EARSINIDEI LRQIDEDREK VRRKEGRRDD FLKPVLVIVE SPHKAWTIAN 
FFGKPISRNV NGQELYEVIT EDKYLVITAS FGHVLDLNKE IGYFGVIEKE KFIPVYEPID 
KKERMIEGIR DASKEFDMIL VATDPDTEGE KISWDLKNLC TPFVKEIRRM EFHEITKKAI 
LNALKESRNV NENLVKAQVV RRISDRWVGF ELSQLIQKVF SKSSLSAGRV QTPVLGWVIE 
RAKENRKKIH IVSVKRYGLD IKFEFEDKQK AQKFYNGLKY IQINKSSEKI QEKSPLPPYT 
TDALLKDASE KYKISVSRTM EILQELFERG FITYHRTDST RVSDVGISVA KSYIAEQFGE 
EYFKGRTWGE GGAHECIRPT RVLDVEDIKS MIYSGELEDF TPDHLKIYDL IFKRFISSQM 
RNVVVKSCDI TVKAFDKEQT FEIYEEIIQE GYNKIFPIKL TKIPTGEVVV VNYKSFYSVP 
KVPLFTQGTL VEEMKKRGLG RPSTYATIVS RLLERGYVVE KEGYLIPTPL GEKVYKFLNS 
SPEKFKFVRE DFTRELEQLM DKVELGEEDY QKILKNLKME IERI