| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1255 |
|---|
| Symbol | |
|---|
| ID | 5452407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1356600 |
|---|
| End bp | 1357352 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640875031 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001410759 |
|---|
| Protein GI | 154249934 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000209406 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTA TAGAAGTTAA AAATCTGTGG TATGCATACA AACCGGGAAA GTATGTACTT
GAAGATATTA CGCTTTCTTT TGATGATAGA CCAACAGCGA TAGTTGGTGA AAATGGCGCA
GGAAAGACAA CGTTTGTAAA ACTTTTAAAA GGCCTTTTGA AACCTGTTAA AGGAGATGTT
TTTATCAAAG GTCAAAATAC AAAAGAAGCA ACGGTGGCAC AACTTGCGAA AGTTATAGGG
TTAGTATTTC AAAATCCTTC AGATCAGATA TTTAAGAGCA AGGTTATAGA TGAAGTTATG
TTTGGTCCCC TTAATATATT CAAAGATAAA CATTTATCTT ATGAAAAATC ACTGAAAGCT
TTAGAATTAG TTGGTCTGGA AGATAAAAAA GAAATACATC CTTACGATTT GACTTTATCT
GAGAGAAAAT TGCTTTGTCT TGCTTCCGTA TTGGCTATGG AGCCGGAGAT AGTAATCTTA
GACGAACCAA CGATAGCCCA AGATAGATAT TCGATAAGTC GTATAGCTGA GATAGTTAAA
AATCTTGTTC AGAGCGGTAA GATTATTTTA ACTATAACTC ACGATATGGA TTTTGTTTTG
GAGAATTTTG AAAGGACCAT AGTTTTTTGC AAAGGAAAGG TGATTTCTGA CGGACCAACA
AAGGAAGTTT TAAAAGATGA AAGTAAAATT ATACAAGCCC ACCTTGAATT GCCTACTTTG
TATAAGTTAC GTAAAGCTAT CGACAAAAAA TAA
|
|---|
| Protein sequence | MGIIEVKNLW YAYKPGKYVL EDITLSFDDR PTAIVGENGA GKTTFVKLLK GLLKPVKGDV
FIKGQNTKEA TVAQLAKVIG LVFQNPSDQI FKSKVIDEVM FGPLNIFKDK HLSYEKSLKA
LELVGLEDKK EIHPYDLTLS ERKLLCLASV LAMEPEIVIL DEPTIAQDRY SISRIAEIVK
NLVQSGKIIL TITHDMDFVL ENFERTIVFC KGKVISDGPT KEVLKDESKI IQAHLELPTL
YKLRKAIDKK
|
|---|
| |