Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1252 |
Symbol | |
ID | 5452305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1352285 |
End bp | 1353628 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640875028 |
Product | gluconate transporter |
Protein accession | YP_001410756 |
Protein GI | 154249931 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00700727 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGTTT GGATGGTTAT CTTGTTGCTA CTCTCCATTA TCTTTATAGT TTATTCTACG GTTCGCTGGA GACTACATCC ATTTCTTGCA TTAATCTTCG CTGCGTTTTT GTACGGAATT TTATCAAAGA TGAACTTAGG AGACATCGTA AAGTCCATTA CTGAAGGTTT TGGTGGAACT GTGAGTTCTA TAGGTATAGT TATTGTTGCT GGTACTATCA TCGGAGTGTT TCTTGAAAAA TCTGGTGGAG CATTCACTAT GGCAGAATCT GTTTTAAAAT TAACTGGGAA GAAGAATGTT CCACTGGCTA TGAGCATAAT AGGGTACATA GTATCTATAC CTGTTTTCTG TGACTCTGGA TTTGTTATAT TAACCCCTCT CAATAAAGCT CTCACAAAAC GTGCAAATCT TTCACTTGCC ACAACGGGTA TAGCCTTAAG TTTAGGTCTT TATGCAACAC ACACTATGGT TCCACCAACA CCAGGCCCAG TTGCTGCCGC CGGTGCTCTA GGTGCAGATT TAGGACTTAC TATACTGATG GGTCTAATAG TGTCTATTCC AGCAATAATA GTAGGTTGGA TATTTTCAAT AAAGTTTGCT TCAAAGATAC AAATAGACCC TGAACCAGAA TTAACTGAAG AAGAAATAAA TAAGAAAATG AAAGAAGCTC CTTCTGCAGC TGGAGCATTC CTCCCTATAG TTCTTCCAAT AATTCTTATA GTTTTAAAAT CCGTTTCAGA TTTTCCAACA AAACCATTTG GAGATGGCTT TTTACGCAAT TTCATTGGTT TCGTTGGACA TCCAGTAACA GCATTAATGA TAGGTGTCTT GATTTCATTC TTACTACCAA AGAAAGTTGA CAAAGAGATA TTCTCGATGA CTGGATGGGT TGGTCAAGCT GTTCAACAGG CAGGAATTAT CATCCTTATC ACGGCGGCTG GTGGTGCATT CGGTAAAGTT TTGCAAAATT CAGGCATAGC AAACGTTATA GGTCAATACC TTTCCGCCGC GAACCTTGGA ATGTGGCTTC CGTTTATTAT AGCTGCAGCT ATAAAAACGG CGCAAGGGTC ATCAACTGTA GCTATAATAA CTACCGCATC GTTATTAGCA CCTCTCATGG AATCTTTAGG TTTTACTTCT AATATGGCAA AAGCTTTAGT TGTCGTAGCA ATAGGCGCTG GTTCAATGGT TGTATCACAC GCCAACGATA GCTATTTCTG GGTTGTATCG CAACTTTCTA AAATGGATGT AAAAACTGGA TACAAATTGC AAACTTTTGG TACACTCCTT GAAGGTATTA CCGCAGCTGT CGTTGTTTGG ATCTTCAGCT TTTTCTTAGT ATAA
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Protein sequence | MGVWMVILLL LSIIFIVYST VRWRLHPFLA LIFAAFLYGI LSKMNLGDIV KSITEGFGGT VSSIGIVIVA GTIIGVFLEK SGGAFTMAES VLKLTGKKNV PLAMSIIGYI VSIPVFCDSG FVILTPLNKA LTKRANLSLA TTGIALSLGL YATHTMVPPT PGPVAAAGAL GADLGLTILM GLIVSIPAII VGWIFSIKFA SKIQIDPEPE LTEEEINKKM KEAPSAAGAF LPIVLPIILI VLKSVSDFPT KPFGDGFLRN FIGFVGHPVT ALMIGVLISF LLPKKVDKEI FSMTGWVGQA VQQAGIIILI TAAGGAFGKV LQNSGIANVI GQYLSAANLG MWLPFIIAAA IKTAQGSSTV AIITTASLLA PLMESLGFTS NMAKALVVVA IGAGSMVVSH ANDSYFWVVS QLSKMDVKTG YKLQTFGTLL EGITAAVVVW IFSFFLV
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