Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1242 |
Symbol | |
ID | 5451601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1340373 |
End bp | 1341395 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640875018 |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_001410746 |
Protein GI | 154249921 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0655276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA CAGAACGCCA AAAAAAGATA CTTTACTGCA TTGTTCAGGA TTACATAAAC ACAAAAACTC CGGTAAGTTC TAAACGTGTG CTTGAGAGCG CTATTATAGG GCGTTCTGGC GCAACTATAC GAAATGATAT GAATAGGCTT ATGAGGGCTG GTTACATTTA TCAACCACAC ACATCCGCTG GAAGAGTTCC TACCGACAAA GGGTTACGTT TTTACGTTAG TGAATTGAAA AAAATACGTG ATGAAATAAA GTCGAAAAGC ACACATGTTG ACACAGCGGC TAATTTTCCA ATAGGTGATA TGGAAAAAGT TCTCACCGGC GCGGCAAAAT TGCTAAGCTC TTCAACTAAA GGCATGGTAA TTATAGAAAA ACCAAATCCT CTAAACCTAA GAGTAAAGAG AGTTGTAATT ACACCTGTTA GTAAGAATTT TTCAATAGTG AATATAGTTA CCTCGCTTGG TTTAAGCTCT TCAATACCAC TTCAACATGG CGAAATTGAA AATGTAGCAC ACGTTGAGGA AATACTTAAC AAGGTTATCT CTGGACTTAC TTTGAATGAG TTTAAAACAA GAATTAAAGA AATAATATCC AAGATAAATA ATTTCAAAGA ATTCGATTTT TCAGAAATGG GGAAAGGGTT TTTGGAAATA ACTGAGAGAT TGTCTATGGA GAGATACGAA GATTACATTT CAGAAGGACT GTATAATTTG TTGTCTAATG ACAGAATAAA CCTTAAGAAG TTGCAAAATA TACTTGGCTA TGTTTCCAGT GAAGATTTTT ACAAAGACGT TTTTGAATTG GAAAGCGATA TATACATAGG TAAAGAACAT AGCTTAAGAT TTTTAGATGA TTTCTCAGTA ATTTTAGGTG ATTTTTACGC AGAATCAACA CCAATTGGAC GTATCGCTGT TATATTTGAC AAGTATGGAA AGTACGATCA AATAATAGAT AGCTTTGAAT TCATGCTTAA CAGATTGACA GAATACTTCA CAGTTGTATC AAGAAATGTG TAA
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Protein sequence | MDITERQKKI LYCIVQDYIN TKTPVSSKRV LESAIIGRSG ATIRNDMNRL MRAGYIYQPH TSAGRVPTDK GLRFYVSELK KIRDEIKSKS THVDTAANFP IGDMEKVLTG AAKLLSSSTK GMVIIEKPNP LNLRVKRVVI TPVSKNFSIV NIVTSLGLSS SIPLQHGEIE NVAHVEEILN KVISGLTLNE FKTRIKEIIS KINNFKEFDF SEMGKGFLEI TERLSMERYE DYISEGLYNL LSNDRINLKK LQNILGYVSS EDFYKDVFEL ESDIYIGKEH SLRFLDDFSV ILGDFYAEST PIGRIAVIFD KYGKYDQIID SFEFMLNRLT EYFTVVSRNV
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