| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1169 |
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| Symbol | |
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| ID | 5452782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1255860 |
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| End bp | 1257242 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640874940 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001410673 |
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| Protein GI | 154249848 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00434596 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAC AAGTACTATT AACTATATTT GGAGTAATTG TTCCACTAAT TGGTGTGTAT
TATTCTGTAA AAAAAGGTAA AAAACCACTT AATTACATAT TTTTGTTAAT TTCTCTCGCA
CTATACTACG GTGCTCTTTT CAATGTAAAA TACCTTTATT TATTCAGTCC AAGATTCAAC
TTTATCATCG CTCCAATTGT TTATTTCTAT TCATTCGACT TACCGGGTCT TGCAAAGTTC
ATAAGAAATC GCTTGGCTCA AATTGTGCTC TTACTTGTAA TCTACGTAAC CGTGGTATTT
TTCATTTTCT TAGCAATGCC TGGTGATTAC ACAACAAAAT TCTTGGATCC AAAATTAATG
AGAAACCCTG AGATGTACGA ACGGATGAAA CAACTCTTTG GAGTCGAAGA CCCGTGGTAT
GTAAAATACT ACAAACATAT GAAAAACTTC TTCAATTTGG AAATGGGAAT TTCGTTTAGT
GAATATCCCA AAAAAGTTGA AGAAATTATA GCCGAAAGGT TGCCAAGAAC ACTATTTTTA
TTCTTAGCAA GTTCAGTACT TTCCTTCTTG TTAGGATTTG ACCTTGGAAA AAGAATAGCA
TGGAAACGTG GAGGAATAAC CGATAAAGCG GCAACACTTG TCGGTATTAT CTTTTGGACA
ATATTTACTC CATTTTACAT GCTTATAATA ATATGGCTCT TCGCAGTTAC TTTGAAATGG
TTCCCACTTT CCGGATTCGT TACTCCATCA AAATGGTTTA ATGCTCCATT CAGCGCACAA
AACGTTTTCA TAAGATTACT TTGGACAGAA CTATTCTTAC TCATCATGTG GATAATGGGT
ATAGCCATAG CAAGTAAGTT AAAAACAATA AAAGCCAAAA AAACCGCGAT ATGGTCATCA
GTAATAGCTG GAATTGCTTT GTCTATAATT TACTGGCTAA CAAACGGTAT GGGAAGTTAT
GCTCTGGACA TAATTTACCA TTTAGCACTC CCAACAATCG CTCTTGTCAC ATTACACTTT
GCAGGAGACA TGTTAGTTAT GAGAGACACC ATGCTTGAAG TTATTAAAGA AGACTATATC
ACAACCGCAC GCGCAAAAGG TTTGCCAGAT AAAGTAATAA GAGACAAACA TGCTGCGAGA
ACGGCTTTAC TACCGTTGAT GACCAGCTTT GTCATAGGTC TTGCCTCAAC TGTCAGTGGT
GGAGTCATCA CTGAAACTAT GTTCTCTTGG AAAGGTATGG GATTAACGTT GCTCGAAGCA
ACAACCGCGC AAGATACACC TCTTGCAATT GGATGTCTTG TCTTTACAGG TGTGCTCGTA
CTTTTTGCAC ACCTTATAGC GGATATACTG TACGCATTCT TAGATCCACG AATCAGATAC
TGA
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| Protein sequence | MTKQVLLTIF GVIVPLIGVY YSVKKGKKPL NYIFLLISLA LYYGALFNVK YLYLFSPRFN
FIIAPIVYFY SFDLPGLAKF IRNRLAQIVL LLVIYVTVVF FIFLAMPGDY TTKFLDPKLM
RNPEMYERMK QLFGVEDPWY VKYYKHMKNF FNLEMGISFS EYPKKVEEII AERLPRTLFL
FLASSVLSFL LGFDLGKRIA WKRGGITDKA ATLVGIIFWT IFTPFYMLII IWLFAVTLKW
FPLSGFVTPS KWFNAPFSAQ NVFIRLLWTE LFLLIMWIMG IAIASKLKTI KAKKTAIWSS
VIAGIALSII YWLTNGMGSY ALDIIYHLAL PTIALVTLHF AGDMLVMRDT MLEVIKEDYI
TTARAKGLPD KVIRDKHAAR TALLPLMTSF VIGLASTVSG GVITETMFSW KGMGLTLLEA
TTAQDTPLAI GCLVFTGVLV LFAHLIADIL YAFLDPRIRY
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