| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1168 |
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| Symbol | |
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| ID | 5451516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1253946 |
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| End bp | 1255766 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874939 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001410672 |
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| Protein GI | 154249847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000870652 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAC TTGTTGTATT TTTAGCAGTA CTTTTTGTAG TTTCGCTTTT TGCAGTGCAA
GTAAACTACG GTATATTCTC TGATATTACA ACAACAAACA TTTGGAACTT ACTCGGTTCA
GGTTCGTCTT CCTGGAACTT CGTTGTCCAA CTTTGGAAAT ATCCATCACT ACTTGGTATG
AACAAAGAAG GTCAGCTCAT ACCATCCGCA GCTGCCGATA TTCCAAAAAT CGTTAAAGAA
GGAAATATGT ACACCGTTAC AGTGAAACTC AGAAAAGATA TGCGCTGGTC AAACGGTGCA
CCATTTACAG CAGACGATGT TGTTTTTACG TACACAACGG TTAAAGGCAT GGAAATACCA
GGTGGTAACT GGGGCGGAGC TTACGAACCA GAAAAAGTTG AAAAAATCGA CACATGGACA
GTAAAATTCT ACTTCAAGGA AAAGAAGACA ATGACAATTT ACTATGACAC ATTAATGACG
GCAATTGTCT GTAGCAACTA TTGGAAACCT ATAGTAGATA AGGCAAAGAA ACAGAAAGAT
CCAGTTAAAT GGTTACTCTC TCAAGAAGTT ATAGACCCAG GTATAACAGC ACTCAACCTT
GGCAAAATTG AAAAAGGTGC GTTCGTACAA GTTGTAAAAC AAATTTCAAA TGATAAATAT
TGGTCATACG GAGAAAAGAA CTTATACTAC AAAAACGGCG GTTTTTCAAT TGTTAACCCA
AAGACAGGTT TCAAATGGTC AACAACAGAT CCAAAACCGG CTGGCGATGT AGCTCTCGAA
GTTGTTAATG GACCATTTGT AGACACAATA GTTTACAAAG TTTACGGTAA CAAACAAGTT
GCTATTCAAG CACTTATCGC CGGTGACATT GACTACATTT ACAACCCAGT TGGACTAACG
GCAGGTGAAG CAGAGCAACT CAAGGGACAG AAAGATATAA AGATAGTTTC CAACCCACAA
CTTGGTTTCA GATACCTTGC ATTCAACATG AGAAAATTCC CAATGAACGT GAAAGAATTC
AGACAAGCAT TGGCAGCATT AATCGACCGC GATTTCATAT GTAACCAAGT GCTCCAAGGT
AGAGCTATTC CACTTGCAAC ACCAGTGCCA CCAGCCAACA CATTCTGGTA CAATTCCGCA
GTTAAAACTA TCGGTGAAGG ACTCAGTATG GGTGAAAGAT ATCAACTTGC AATCAATTTA
CTTAAGAAAG CCGGCTTCAA ATGGGACGTT GAACCCGTTA TCGATCCAAA AGATACAAAA
AACCCAGTTA AAACACAAGG TAAGGGCTTA AAAGGTCCAG ATGGCAAACC AGTACCAACA
CTTACCCTCT TATCACCAGG TATGGATTAC GACCCAATGA GGGCACAAAC AGCTATGTAT
ATTGAACAAT GGGCAAAGAA CATCGGTATG CCAATTAACC TTAAACTTAC AGATTTCAAC
GAAATTTCAA CAAAAGCATT CGATGATGTT GACTTCGATA TGTACATACT CGGTTGGGGT
GTCGGAAGAG TTCCAACATA CTTCAAATCA TTCTGGCACA GTGGAGAAAT GGCACCAGAT
GGATTTAACA CACCAGGTTA CAAAAACCCA GAATTTGATG CTCTTGTAGA AGAATTTGAA
TATGCCGATG ACTTCAATCA AGCAAGAAAG GCAATATTTG AAGCACAAAA GATACTCGCA
GACGATCTCC CATACATAAT CCTCTTCACA AATCCAATGA TAGAAGCATA TAGGACCTCC
ATTAAATTCC CATTCGACAA TATGCTTGAT GGTATCCAAG GTTACTACGG ATTCCCAGAA
GGAGTAAAGA AAGCACAATA A
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| Protein sequence | MKKLVVFLAV LFVVSLFAVQ VNYGIFSDIT TTNIWNLLGS GSSSWNFVVQ LWKYPSLLGM
NKEGQLIPSA AADIPKIVKE GNMYTVTVKL RKDMRWSNGA PFTADDVVFT YTTVKGMEIP
GGNWGGAYEP EKVEKIDTWT VKFYFKEKKT MTIYYDTLMT AIVCSNYWKP IVDKAKKQKD
PVKWLLSQEV IDPGITALNL GKIEKGAFVQ VVKQISNDKY WSYGEKNLYY KNGGFSIVNP
KTGFKWSTTD PKPAGDVALE VVNGPFVDTI VYKVYGNKQV AIQALIAGDI DYIYNPVGLT
AGEAEQLKGQ KDIKIVSNPQ LGFRYLAFNM RKFPMNVKEF RQALAALIDR DFICNQVLQG
RAIPLATPVP PANTFWYNSA VKTIGEGLSM GERYQLAINL LKKAGFKWDV EPVIDPKDTK
NPVKTQGKGL KGPDGKPVPT LTLLSPGMDY DPMRAQTAMY IEQWAKNIGM PINLKLTDFN
EISTKAFDDV DFDMYILGWG VGRVPTYFKS FWHSGEMAPD GFNTPGYKNP EFDALVEEFE
YADDFNQARK AIFEAQKILA DDLPYIILFT NPMIEAYRTS IKFPFDNMLD GIQGYYGFPE
GVKKAQ
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