| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1027 |
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| Symbol | |
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| ID | 5453132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 1124447 |
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| End bp | 1126555 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874788 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001410533 |
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| Protein GI | 154249708 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAT CCGAGACAAA GAAAACAACA AAGTCTTCAT CTTCTAATGA AAAAGCTGAT
AAAACTAAAA AGAAACAATC TCAATCTTCA TCTCAAATTA TCGATAATTC AAACGTTTCA
AAAGTTATTA TAGTTGAATC CCCTGCAAAG GCAAAAACAA TAGAAAACAT TCTCGGAAAG
GAATACAAGG TTATATCATC TAAAGGCCAC ATCCGTGACC TTCCGCAAAG GGATTTCGGA
GTAGACTTAA AATCCTTAGA TGTTGTTTTT GAAATAATTC CGGGAAAAGA AGGAGTCGTT
GAGCAGATTA AAAATACAGT TAAAGGTAAA GAAGTGCTTC TCGCTTCCGA CCCTGATAGG
GAAGGAGAAG CTATCGCGTG GCATCTTGCA ACTATTTTAA ACATAAATGG AAAAAATAGA
ATAACATTTT CCGAAATCAC GCCAAAGGCA ATTCAAGAAG CGGTTAAATC ACCACGTGAG
ATAGATATGA AGAAAGTAAA TGCCCAACTC GCAAGAAGAG TGCTTGACAG AATCGTTGGT
TACAAAATCA GTCCGCTTCT TTGGAAGATA ATAAAAGATG CCAAAAGCGC TGGACGCGTT
CAATCGGCTG CTCTAAAAAT TCTCTGTGAA CGTGAAAGGG AAAGAATAAA ATTTGTACCT
CAAAAATACT ACAAAGTTTG GATTGAAATC GCAGGACTTA AAGCCAATCT CACAAAAATT
GGCAACAAAA AATTAAAACC AACCGATATC ACAAAAGAGA TAGCCGATGA TGTTTTAAAA
AACGTTAAGA GCGTCAATTT AATAGACATA GACGTAAAAG AAGTAAAGAA AAATCCACCC
TTACCTTTTA TAACGAGTAC ACTGCAACAA GATGCTTCAA GCAAACTTGG ATTTCCAGTT
GCGAAAACGA TGAAAATCGC TCAAGAACTT TACGAAGGTA TAGACACGCC GGAAGGTCAC
ATAGCGTTTA TAACCTACAT GCGTACAGAT TCAACAAGAA TTTCCGACGA GGCAAAAGAA
GCTGCAAAAG AACTAATATC AAAAAAGTTT GGCGAAGACT ATCTCGGAGA TGAGATAAGA
AAAACTTCAA AAGAAAAAAG TAAAGCCAAA GTTCAAGACG CACATGAATG TATAAGACCT
GTTAACGTAA ATCTTCTTCC TGAAGAAGCG CAAAAACTTT TAGATAAAGA CCATTACAGA
TTGTACGAAT TGATTTGGAA AAGGTTTATC GCATCTCAAA TGAGCAGTGC CATTTATAAG
CAATACAGTT ACGATTTTAA ATCAGGAGAT TACATATTTG AAGCTTCTAT ACGCGAGAGA
ATATTCGATG GTTTTGAATC TGTATACAGC ACAGATAACG AAATAAGTGA GGAACACAAA
GAGTTAAAAA TCGGCGAGAG TTACGATGTT TTACCAAAAA CAGCGGAAGC GGAAACAACA
CCACCTGATA GATACAGCGA GGCATCTCTT GTAAAAATTT TAGAAAGTGA AGGTATAGGA
CGACCAAGCA CTTATGCAAC GATAATCCAA ACATTATTAA ATAGAAAGTA CATTATAAGG
AATAGAAAAA CACTTATTCC TACTGTACTT GGATTTGTAG TAAATGACTA TCTTGAAAAG
AAATTTCCCG ATATAGTTGA CAAAGGTTTC ACGGCTGAGA TGGAAAAACA ACTTGATGAA
ATTGAAAATG GTACAGCACA ATGGAAAGAT GTAATAAAGA ATTTTATGAA AGAATTCGGT
AGAGACTTGG AAAACGCAGG GAAAGAATTC TTCACAATAA ACTTTGAAAC TAATAAAATC
TGTGAAACGT GTAAAGAACC ATACCATCTA AGAGTTGGAA AATATGGCTT GTATCTTAAT
TGTCAAAAAT GCAATACAAA TAAGTCTGTA AAAATCGATG AACTTGGTGT CCTACTTGAA
GGTAAAATGT ACTTCATCGA AGAAAAAGAT GAAAAAACAG AAGATGAAAG CGACACAACT
CAAGACGAAG CTAATGAAAA AAAATCGGGA TACTCTAGCA AAAAGAATTA CTACAGATAC
AAAACTTCTT CGCGAAAATC GGCTAAAAAT CAATCTAAAC AAACTAATAA AAGCAAAAAA
AGTAAGTGA
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| Protein sequence | MAKSETKKTT KSSSSNEKAD KTKKKQSQSS SQIIDNSNVS KVIIVESPAK AKTIENILGK
EYKVISSKGH IRDLPQRDFG VDLKSLDVVF EIIPGKEGVV EQIKNTVKGK EVLLASDPDR
EGEAIAWHLA TILNINGKNR ITFSEITPKA IQEAVKSPRE IDMKKVNAQL ARRVLDRIVG
YKISPLLWKI IKDAKSAGRV QSAALKILCE RERERIKFVP QKYYKVWIEI AGLKANLTKI
GNKKLKPTDI TKEIADDVLK NVKSVNLIDI DVKEVKKNPP LPFITSTLQQ DASSKLGFPV
AKTMKIAQEL YEGIDTPEGH IAFITYMRTD STRISDEAKE AAKELISKKF GEDYLGDEIR
KTSKEKSKAK VQDAHECIRP VNVNLLPEEA QKLLDKDHYR LYELIWKRFI ASQMSSAIYK
QYSYDFKSGD YIFEASIRER IFDGFESVYS TDNEISEEHK ELKIGESYDV LPKTAEAETT
PPDRYSEASL VKILESEGIG RPSTYATIIQ TLLNRKYIIR NRKTLIPTVL GFVVNDYLEK
KFPDIVDKGF TAEMEKQLDE IENGTAQWKD VIKNFMKEFG RDLENAGKEF FTINFETNKI
CETCKEPYHL RVGKYGLYLN CQKCNTNKSV KIDELGVLLE GKMYFIEEKD EKTEDESDTT
QDEANEKKSG YSSKKNYYRY KTSSRKSAKN QSKQTNKSKK SK
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