Gene Fnod_0725 details

Gene Information

• Locus tag: Fnod_0725
• Symbol: thrS
• ID: 5452628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 788308
• End bp: 790224
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640874471
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001410237
• Protein GI: 154249412
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATTA GGTTACCAGA TGGAAGCGTA AGAGAATACT CACAACCAGT AACACCAGGA 
CAAATAGCCA AGGAAATTTC GGAAGGTTTG TGGAGAAATG CCGCAGGAGC ATTAGTTAAT 
GGTCAGCTTT GGGATTTGGA AAGACCTATC GATTTTGATT GTGAGTTAAG AATCATCAAG 
CTAGATGATC CACAAGCAGC TGAAATTTAC AGGCATACAA TGTCACATAT CATGGCACAA 
GCAGTTATGA GAATCTATGG GGCTGAAAAT GTAAAACTTG GAATCGGCCC AACAATAGAG 
AATGGTTTTT ATTACGATTT TGATATCGCA AACGTAAAAA TTACAGAAGA AGATTTGCCA 
AAAATCGAAG AAGAGATGAA AAAGATAATC AAAGAAGATT TACCAATAGA AAGATTAGAA 
CTTCCAAAAA AAGAAGCTAT TGAACTAATG GAAAGCAAAG GGCAAATGTA CAAGATTGAG 
TTGATAAACG AAATTCCAGA CGAAAAAGTT AGTTTCTACA AACAAGGTGA ATTTATTGAC 
CTTTGTAGAG GTCCACACTT ACCAAGTACA GGGAAAGTCA AACACTTAAA GTTGCTTTCT 
GTTTCTGGAG CGTACTGGAG AGGTAACGAA AAGAACCCAA TGCTTCAGAG GATTTACGGA 
ACAGCATTCG CCAAGAAAGA CGAGCTCGAT AATTACCTAA AAATGCTTGA AGAAGCAAGG 
AAAAGAGACC ACAGAAGACT TGGACCTCAA CTCGAATTGT TCTTCATCAA CACAGATGTT 
GCGGCCGGTA TGCCTATATT CCTGCCATAT GGTATGACAG TCCTTAAAGA ACTAATGAGC 
TTATCGAGAG AATTGCATAA AAAATACGGT TACAAAGAGG TTGGCACCCC ACTTATAATG 
CACGAAAAGC TCTGGAGACA GAGTGGACAC TGGGACCACT ACAAAAACAA CATGTACTTC 
ACAGAAAAAG AAGAAGTAAC TTACGCTGTT AAACCAATGA ACTGTCCAGG ACACATATTG 
ATATACAAAA ACAAACCTGT TTCTTACAAA GACCTTCCAA TAAGACTGTT TGAATTCGGT 
AGAGTACACA GATACGAACG TGGAGGAGTA TTGCATGGAT TATTAAGAGT CAGAACATTC 
ACGCAAGACG ATGCCCATAT TTTCTGTAGA GAAGACCAGA TAGTCGATGA AGTAACCAAC 
GTTGTAAGGT TTATAAACGA ACTCTATGGC ATATTTGGCT TTTCTTATAG AGCAACTCTT 
AGTACAATGC CCGAAGATCA TATGGGTGAC GAAGCGACGT GGGAAAAAGC AACAGAAGGA 
TTAAGAAATG CTCTTGAAGA GATGAAAGTA CCTTACGAAG TCGCGGAAGG AGAAGGCGCT 
TTCTACGGTC CAAAGATAGA TTTCCACGTT AGAGACGTAC TTGGAAGAGA ATGGCAATGC 
GCAACCATTC AAATGGATTT CCAAATGCCT GAGCGCTTTG ACTTAACATA TAAGGATTCG 
GATGGAAACG AAAGAAGACC TGTCATGATA CATAGGGCAC TTTATGGTTC TATCGAAAGA 
TTCTTTGGTA TTCTTATTGA ACATTACGCA GGAGCGTTCC CAACATGGCT TGCACCTGTT 
CAAGCCGTTG TTATACCAGT ATCCGAAAAA TTCTCAGAAT ATGCAAAGAA CATTTACCAA 
ACTCTTGATG AAAACGACAT CAGGGTTGAA TTAGATGATA GAAATGAAAC ACTTAGCTAC 
AGAATAAGAG AAAATCAAAT GAGAAAAGTA CCGTACATGA TAATAGTCGG TGAAAAAGAA 
AAGGAAAGTG AAACGATAAG CGTAAGGACA AGAGAAGGAA AAGACACTCA CGGAATTAAG 
ATAAATGACT TCATAGAGAC TGTACTTAAT GAAATAAGAA AAAGAGTAAA CAAATAA 

 

Protein sequence

MQIRLPDGSV REYSQPVTPG QIAKEISEGL WRNAAGALVN GQLWDLERPI DFDCELRIIK 
LDDPQAAEIY RHTMSHIMAQ AVMRIYGAEN VKLGIGPTIE NGFYYDFDIA NVKITEEDLP 
KIEEEMKKII KEDLPIERLE LPKKEAIELM ESKGQMYKIE LINEIPDEKV SFYKQGEFID 
LCRGPHLPST GKVKHLKLLS VSGAYWRGNE KNPMLQRIYG TAFAKKDELD NYLKMLEEAR 
KRDHRRLGPQ LELFFINTDV AAGMPIFLPY GMTVLKELMS LSRELHKKYG YKEVGTPLIM 
HEKLWRQSGH WDHYKNNMYF TEKEEVTYAV KPMNCPGHIL IYKNKPVSYK DLPIRLFEFG 
RVHRYERGGV LHGLLRVRTF TQDDAHIFCR EDQIVDEVTN VVRFINELYG IFGFSYRATL 
STMPEDHMGD EATWEKATEG LRNALEEMKV PYEVAEGEGA FYGPKIDFHV RDVLGREWQC 
ATIQMDFQMP ERFDLTYKDS DGNERRPVMI HRALYGSIER FFGILIEHYA GAFPTWLAPV 
QAVVIPVSEK FSEYAKNIYQ TLDENDIRVE LDDRNETLSY RIRENQMRKV PYMIIVGEKE 
KESETISVRT REGKDTHGIK INDFIETVLN EIRKRVNK