Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0703 |
Symbol | |
ID | 5452704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 767126 |
End bp | 767971 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640874449 |
Product | HflC protein |
Protein accession | YP_001410215 |
Protein GI | 154249390 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAG CAAAACTTAT CACCGCTATT TTCGTTATTA TCTTAGCGAT AATATTTCTT GCACTTTCAA TTGTTATAGT CGACGAAACC AAATATGTAG TTATATTACG CTTTGGTGAA ATTAGAAAAG TTATAACCGA GCCGGGATTA AACTTTAAAA CCCCTTTCGT TGATAACGTT GTGAAATTAG ATAAGAGATA CTCTATTTAC GATATACCAC CTGAGAGAAT TATCACAAAA GATAAAAAGA CTCTCATCGT TGATTCATAT ATTATTTGGA AGATTTCTGA CCCAAAACTT TTTATTGAAA GCATGAGAAC TGAGAGCCTA GCTTTATCAA GGTTAGATGA TGTCGTATAT TCAGGTTTGA GAAATACACT TGCGAAGTTA GATATGGACA CAATTGTAAC ACAAGAAAAG ACATTCTTAA AGGATGTATT AGATTTTTCC ATCAGCAACA CAAAAGATTA CGGAATACAA GTGATAGATG TAAGAGTCAA GAAAACAGAT TTACCAGCGG AAAATAGAAA TGCAGTATTC GAAAGAATGA AATCAGAAAG ACAAAGCATA GCAGCGTTGA TAAGAGCAGA AGGCGAGAAA GAGGCACAAA AAATCAGGTC AGAAGCAGAC AAAAAAGCAG CTATAATAAA AGCGGAAGCA CTTAGTAAAG CGGAATATAT AAAAGGAACT GGAGATGCAA GTGCTACAAA GATATACGCT GAAGCGTATT CAAAAGATGA AAGATTCTAC AAACTTTGGA AAACACTTGA GAGTTACAAA GATATTGTAC CTGGTAGTGT AATTATTTTA AGCAAAGATG CTGAAATATT GCAATATGTT AAGTAA
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Protein sequence | MTKAKLITAI FVIILAIIFL ALSIVIVDET KYVVILRFGE IRKVITEPGL NFKTPFVDNV VKLDKRYSIY DIPPERIITK DKKTLIVDSY IIWKISDPKL FIESMRTESL ALSRLDDVVY SGLRNTLAKL DMDTIVTQEK TFLKDVLDFS ISNTKDYGIQ VIDVRVKKTD LPAENRNAVF ERMKSERQSI AALIRAEGEK EAQKIRSEAD KKAAIIKAEA LSKAEYIKGT GDASATKIYA EAYSKDERFY KLWKTLESYK DIVPGSVIIL SKDAEILQYV K
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