| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0669 |
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| Symbol | |
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| ID | 5451562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | + |
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| Start bp | 732157 |
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| End bp | 732885 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640874413 |
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| Product | ABC transporter related |
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| Protein accession | YP_001410181 |
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| Protein GI | 154249356 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAA ATCACATGCA TGAAGATAAG TCAAATAAAG CATTAGTACA AGCACAAAAT
TTATCAAAAA TTTACGGGAA TGGTCCGTCG AAAGTTATCG CTTTAGATAA TGTAAACCTT
GAAATATACG AATGTGAAAT TATAGCGATA CTTGGTCCTT CAGGTTCTGG TAAAACAACG
CTTTTGAATT TATTAGCGGG GCTTGATGTA CCATCTTCTG GGCAAATTAT CATTGATGGG
GTAGATATAA CGAGTTTAAG TGAAGAAGAA AAAACAAAAT TCAGAGCAAA GAATATGGGA
TTCATTTTCC AATTTTTTAA CTTAATTCCT GTGCTGAACG CAGTGGAAAA TGTTGAATTA
CCAATGCTTT TGAACAAATA TTCACTTTCT GAAGCAAGAA AAAGAGCACT GGAACTTTTA
GAAAAGTTGA ATATACTTCA TAGAAAGGAT GCTTATCCAT CACAACTTTC TGGTGGAGAA
CAGCAAAGAG TCTCTATAGC GCGGGCACTA TCAACTCGTC CAAAGATAAT ATGGGCGGAC
GAACCAACAG GCGCCCTCGA TAGTAAAAAC GCAGAACAAA TAAAACAATT GATAATAGAG
CTAAATAAAG AATTTGGTAC AACATTCGTT ATAGTCACGC ATGACCCTTC TGTTGCACAA
ATAGCTAATA GAATATTTAG AATGGAAAGT GGACAAATTG TTGAAGTTAT AAATAAATTT
GAAAAATAA
|
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| Protein sequence | MELNHMHEDK SNKALVQAQN LSKIYGNGPS KVIALDNVNL EIYECEIIAI LGPSGSGKTT
LLNLLAGLDV PSSGQIIIDG VDITSLSEEE KTKFRAKNMG FIFQFFNLIP VLNAVENVEL
PMLLNKYSLS EARKRALELL EKLNILHRKD AYPSQLSGGE QQRVSIARAL STRPKIIWAD
EPTGALDSKN AEQIKQLIIE LNKEFGTTFV IVTHDPSVAQ IANRIFRMES GQIVEVINKF
EK
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