Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0615 |
Symbol | |
ID | 5451773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 682637 |
End bp | 683485 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874356 |
Product | DegV family protein |
Protein accession | YP_001410127 |
Protein GI | 154249302 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000252581 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACGT TTATAACCGA TTCAGGCTTT GATTTGCCAA GGAATCTAAA ATTACCGTAT GATATTAAGA TACTTCCACT AAGGGTTTTT GTAAACGAAA AGGAATACGA AGATAAGGTT AGTATCAGTT CCCAAGAGCT TTACAACTTA GAACTTCAAG GGTATATACC AACTACTTCA TTACCAAAGC CAGAAATTAT AGAAAAAACA ATTAGAGAAT CTGCAGAAGA AAGTGAAGAG GTATTTATAA TAACAATCTC ATCCAAATTG AGTAACACAT ACGATTTGGT CAAAAACATA GCAATATCGA TGAATTTAAA AAATGTTCAT GTTCTTGACT CTAAAACTGC TTGCATAAAA CAAGGTTATG TTATTCTCAG AGCGATGGAA CAGGTCAAAA ATACTGGAAA ATTAACTCAA GCAGATATCG ATAAATTTGA GAAAGAATCA CTGTTGGCGT TTTTCGTTCC CACTCTTGAG TATCTTTACA AGGGTGGACG CATAGGCAAG GCGAAAGCTT TGATTGGTAA AGTTTTAAAT TTGAAGCCTA TTTTGACAAC CGATAGCGAT GGTGAAGTTA GTACTTTGGG TACTGTGAGG TCTATGGACA GTGCCATATT AACTATTCAA AATATCGTTA ATAAATTCAT AGAGTCACAG AAAATAACCG ATGATTACAC AGTCATTGGT GCTTACACAA TAGGTAGCAT GAAAACACAT TTTGAAAAGC TTATACAACC ATATAAAAAA GGACTTATTG GTGTTACCGA CATCGGTTCG GCTATAGCGG CTCATATAGG ACCTGAAGCT TTTGGGATTG TCGTAGGTAA GGGGGTGCAC TTAGAGTGA
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Protein sequence | MYTFITDSGF DLPRNLKLPY DIKILPLRVF VNEKEYEDKV SISSQELYNL ELQGYIPTTS LPKPEIIEKT IRESAEESEE VFIITISSKL SNTYDLVKNI AISMNLKNVH VLDSKTACIK QGYVILRAME QVKNTGKLTQ ADIDKFEKES LLAFFVPTLE YLYKGGRIGK AKALIGKVLN LKPILTTDSD GEVSTLGTVR SMDSAILTIQ NIVNKFIESQ KITDDYTVIG AYTIGSMKTH FEKLIQPYKK GLIGVTDIGS AIAAHIGPEA FGIVVGKGVH LE
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