| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0254 |
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| Symbol | |
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| ID | 5451696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 262717 |
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| End bp | 263457 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640874000 |
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| Product | ABC transporter related |
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| Protein accession | YP_001409777 |
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| Protein GI | 154248952 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0374649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAG CGGTTAATTT AACAAAAAAG TTTGGTGATT TTACAGCTGT CGATAGTATC
AACCTAAATG TAAAAAAAGG AGAGATATTT GGATTTCTTG GACCAAACGG CGCGGGTAAG
ACAACCACGA TAAAAATGTT AACTGGTGCA CTGAAACCTA CGTTTGGTAT GGTTGAAATC
CTTGGTATGG ATATGAAAAA CAAAGAAATA GAAATAAAGC GAAGGATAGG CGTTGTTCCA
GATGAACCTA AAATATACGA ACACCTTAGA GGATACGAAT TCCTTGAATT TATTATTTCT
ATCTATAAGT TGGATAAAAA AACTGTTAAA TCACGCATAG ATGACCTTTG CAATGTTTTT
GGTGTGGATT ATCTTGACAA ATTTGCTGGC GAAATGTCAC ACGGTATGAA GCAAAAACTA
ATGCTCATAT CTGTTTTGAT GAGAAAACCG GAAGTGCTTT TCCTAGATGA ACCAACAGTC
GGGCTAGATG CCAAAAGTGC AAAAATTTTA AAAGAGCTTC TTAAGAAATA TGCAGAAGAA
GGTACCACTG TATTTATGAC CACACACATA CTCGAAATAG CAGAGAAGAT GTGCGATAGA
ATAGCGATAA TAAATAAAGG ACAAATCATC GCTGAAGCAA GTGTCACTGA ACTTAAAGAA
AAATATGGTC AATCACTTGA AGATATATTC CTTAATTTAA CCGCTTCAGA AGATATAAAA
GAACTTGTTG AAGAATTGTG A
|
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| Protein sequence | MIKAVNLTKK FGDFTAVDSI NLNVKKGEIF GFLGPNGAGK TTTIKMLTGA LKPTFGMVEI
LGMDMKNKEI EIKRRIGVVP DEPKIYEHLR GYEFLEFIIS IYKLDKKTVK SRIDDLCNVF
GVDYLDKFAG EMSHGMKQKL MLISVLMRKP EVLFLDEPTV GLDAKSAKIL KELLKKYAEE
GTTVFMTTHI LEIAEKMCDR IAIINKGQII AEASVTELKE KYGQSLEDIF LNLTASEDIK
ELVEEL
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