Gene Fnod_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0176 
Symbol 
ID5452946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand- 
Start bp179684 
End bp180361 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content33% 
IMG OID640873923 
ProductDNA repair protein RadC 
Protein accessionYP_001409700 
Protein GI154248875 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.260187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATAG AATACGGTCC AAGGGAAAAG TTATTAAAAG AAGGCAGTGA AGCTCTTGAA 
ACAAGTGAAT TAATAGCTAT TCTGCTCAGA ACAGGAACAA ACGGAAAAGA TGTATTAGAA 
ACTTCAAAAG AATTATTCAA TAAATTTGGT GGAAGTTTAT ACAAAATGTC AAGAGCAACA 
TTTGATGATT TCAAAAGTAT TAAAGGACTT GGAGATGTGA AAATAGTAAC TCTTATGGCA 
GCTTTAGAAC TCGCTAAAAG ATTAGTTAAG GAAGAAACAG TTATCTTAGA CCCAAAATTG 
ACTTCACCTG AAAATGTTTT TCAATATTGT ATAGATATGC AAAGTTATCC CCAAGAAATA 
GTAAGAGTTA TATTCTTAGA TACAAAATTA AAAGTAATTG GAAGCAAAGA TGTATCTAAA 
GGAACTATAA ACTCTTCAAT GGCACACCCA AGGGATATTT TCAGAGAAGC GATTTTGCGA 
AGTTCCACAG GTATAATACT TGCGCATAAT CATCCTTCTG GAGATCCAAC GCCAAGCAAA 
GATGATATAG AATTAACTAA AAAGATTAAG AAAGCGGGCG AATTATTGGG AATAAACCTC 
CATGACCATG TCATAATTGG TCAAACATTT TACAGTCTAA GACAAAAATG TAAAGAAATA 
GGGTGGGATA ATGTTTGA
 
Protein sequence
MPIEYGPREK LLKEGSEALE TSELIAILLR TGTNGKDVLE TSKELFNKFG GSLYKMSRAT 
FDDFKSIKGL GDVKIVTLMA ALELAKRLVK EETVILDPKL TSPENVFQYC IDMQSYPQEI 
VRVIFLDTKL KVIGSKDVSK GTINSSMAHP RDIFREAILR SSTGIILAHN HPSGDPTPSK 
DDIELTKKIK KAGELLGINL HDHVIIGQTF YSLRQKCKEI GWDNV