Gene Fjoh_4966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4966 
Symbol 
ID5094236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp6002947 
End bp6003456 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content31% 
IMG OID644744391 
ProductNLP/P60 protein 
Protein accessionYP_001197284 
Protein GI146302693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.774801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCAT ATCTTTTCAC AGCTTTATTA TCTATTACGC TATTTTCTTC TTTTACCGTA 
AAAAAGAGCG AAAAGCAGAC TTTAATTGAT AATCGAAAAA TTCAAACCGA AATCAATAGA
GATTCTATCA TCGAATATGC TAAAAAGTAT TTAGATACGC CTTATAAATA TGCCAGCAGT
GATCCTAAAA AAGGATTTGA CTGTTCTGGT TTTGTGAGTT ATGTTTTTAA AAATTTTGGC
ATGAATCTGC CAAGAAGTTC CGGCAGTTAC AAAAACTTAG GAACTGCCTT AAAACCTGAA
GATTTTAAAG TTGGAGATAT TTTAGTTTTT TACGGATATA AAGACAGAAC AGTTATAGGC
CATTTGGGAA TAATCTGTGA AGCTGACGGA ATGCATTCTA AATTCATTCA TGCTTCATCA
GGAAAAGCAC AAAAAGTAAC TATTACCGCA TTAGACACAG AACATTATAC CAAACGTTTT
TATAAATGTA TTAATGTTTT ACCTGAATAA
 
Protein sequence
MRSYLFTALL SITLFSSFTV KKSEKQTLID NRKIQTEINR DSIIEYAKKY LDTPYKYASS 
DPKKGFDCSG FVSYVFKNFG MNLPRSSGSY KNLGTALKPE DFKVGDILVF YGYKDRTVIG
HLGIICEADG MHSKFIHASS GKAQKVTITA LDTEHYTKRF YKCINVLPE