Gene Fjoh_4436 details

Gene Information

• Locus tag: Fjoh_4436
• ID: 5093951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 5354989
• End bp: 5358507
• Gene Length: 3519 bp
• Protein Length: 1172 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 644743857
• Product: glucan 1,6-alpha-isomaltosidase
• Protein accession: YP_001196759
• Protein GI: 146302168

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA CACCTGTTTT AATTTTATTG CTAATTTTAT CCTTAGTATT GTCTTTACAA 
AAAGGATTTT CCCAAATCAA TCCGTATAAG GCTCCCTTGT ATTGGAATCC GTATGAATAT 
AATCTTATTA AAAATGATTA TATCCCTGAA GATGAATGGA AAAAAAACAT TGATTGGGTC 
AATGACAATC TAAAATCATA TGGGTACAAT ATGATTTGTA TAGATGGCTG GGGAGATGAC 
TCAAACTATA CTCAGGATGG TTACAGAACA ACACATTCCT CGAATTGGAT ACATGATTAT 
AAATATTGGG CAGATTATTT AAAAGCCCGC GGAATGACAT TAGGTATGTA TAATAATCCT 
TTGTGGGTAA ATAAAAAGGC TGCTGATGCA GGAGTTAAAA TTAAAGGAAC CAATATTCCG 
TTATCAACGC TTCTGAACCC TATTGAAGGT CAGGAAAAAA TATTTAACTG GGTTCAGGTT 
AATAAGCCTG GGGCAGAACA GTACATTAAA GGTTATGTAC AATATTATGC CGATATGGGT 
GTAAGTTATT TAAGGATTGA TTTCTTAGCC TGGTTCCAAA CGGGGGCGGA TAAAGGAGAC 
TTCACATACG GTCCGGCAAG ATCAACCCAA GACTATGAAA AAGCATTAAG ATGGATTCGC 
GAAGCATGCG ATGAAAATAA AATTTTTTTG AGCCTGGTGA TGCCCGAATT AATTGATAAT 
GCTGTTTCTG AGAATAAATA CGGACACATG ATTCGAATTA ACGAAGATCT TGGAGATGGA 
GGGTGGAACA GGTTTAATAA TTTAGATCGA GGCATCCGTC ATAGTTGGTG GTCTCAATAT 
TATAATACTT TTGATGGATA TACCTATTGG TCATTTATTT CAGGACGAAA GAAATTAATT 
CTGGATGGAG ATTTCATTAG ATTAAATTCA CTGGCCAATG ACAATGAAAA AAAAACGGTA 
ATATCGTTAC ATTTAATGGC GGGAGGTCCT TTGTCTATAG CGGATCAGTA TAATTCCATT 
GGACAAGATA TTTCTTATTA TCAAAATGAA GAAATGTTAG CTTTAAATAA AGATGGCTTC 
GTCGGGAAAC CATTATTTAC GAACGATCCA ACAAATGAAT CGAGCCAGGT TTGGGCTGGA 
CAAATGTCTA ATGGAGATTG GATTATTGGT TTTTTTAATA GAGAGAATGT AACTAAGAGC 
CGCACTTTGG ATTTCAATGT GTCTCTTGGT TTTTCAGGTA ATGCATCGGT AAGGGATCTT 
TGGACTCATA CAAATTTAGG AAGCATGTCT TCTTATAGTA TAAACGTGCC TGCGCACGGT 
TGCGTGATTT TGAAAGTTGT ACCAATAAAT CCGCAGCCAG ATATTTTATC AGGAAACAAT 
TATTTTATTA AATCAAAAGC GAATGGTAAA ACAATAGCTT ACAACACCCA AAGAGATTCA 
CTGACCACAA ATAATATTGA TTGGGATAAA TCTGAGCAAA AATGGCTTTT TACCTTTGAA 
AAAAATAAGG AGTATAGTAT TACATCATTG TCCGATAAAA AATCTTTTGA TGTTGTTGAA 
CAGTCTATTA ATGACGGAGC AAAAATTCAC ACATGGCAGT ATTTAGGATT AAACAGCCAG 
AAATGGGATA TGGTTCCTGA TGGGAACGGT TATTATAAAA TCATAAACTC CAATAGTAAT 
AAAGCTCTTG AAATGGATAC AGTAAGGGGA ATTGTAGTTC AATCAGGCAG CATCGGCGAT 
AGTTCGCAAT TATGGACTTT AGACCCCATT TTCGATCACC TCACTTTAGT CGGTCCAGCA 
TCACCAACAG GCAGCTGGAC GAAACCCGAA GGTACTGATG CAACCGATTT TAAAGAAAGT 
ACCTTCGGCT CTAATATCTG GACATTCACA GGATATTTAA ACTTGGGGGA GATTAAAATT 
CATGCGAAAG CAGGTGGTTT TGTTTCAGGC AGCTGGACTA GCGGTTCATG GCTCCAGGCA 
AAAAATAGTA ATGCCAATTT TCTGACCGCC AATGAATATG TGGTAGGAGG TGCTGACAAT 
AAATGGAATG TTGCGGCTCC AGGGCTGTAT AATATTAAAG TAAATTTGCG TGAGAAGAGC 
TTAGACGTAA AAAAAATAGA CTATGATTAT ATGACCCTTG TAGGCCCGGG ATGCTCTATT 
GGAAATTGGG TCACGCCCGA AGGAGATTCA AGTACAGATT TTGCAGAAAC TGCCCCTAAC 
TCAAATATCT GGTTTTTTAA AGGGAATTTA AATGCCGGAG AGATTAAGAT CCATGTAAAA 
TTAGAATCTG ATTTTATTGC AGGTAACTGG CTTGATGGAT CCTGGCTTCA GGCAAAATCG 
GCAAATGCCG ATTTTCTCAC TCAGACAGAA TACCTGATTG ATGACAGCAA TGATTATAAA 
TGGAATATTG AAGAATCTGG GTATTATATT GTAACTGTTG ATCTGAATGT AAATAAGATA 
ACGGTACAGA GAAAATATTT TGATTATATG ACTTTAACGG GACCTGGCTC TCCAACTGGA 
GGTTGGAACA AACCAGAAGG AGATATAAAC ACAGACTTTA TACAAACGTC TCCTAATTCG 
AACATCTGGA CTTTTACAGG GATGTTGAAG GTGGGCCAGG TTAAAATTCA TGCAAAAATT 
GGATCGGTTT TTATAGCTGA CAACTGGCTT GACGGTTCTT GGCTGCAGGC GAAAACCAAT 
AATGCTGATT TCAGAACTGC TGCAGAGTTC ATAATTGACA GCAGCAACGA TTATAAATGG 
AGCGTTGCAC AAGCTGGTCT GTATAAAATT ACAGTCGATC TGACAAATGG ACTCTTATCA 
GTTAAAAGAT TGGATTATGA TTATATTACT TTAGTTGGTC CCGGTTCCCC ATCAGGGAGC 
TGGACCAAAC CTGAAGGTGA TATTGCTACT GATTTGGCCA GAACGACACC AGGCTCGAAT 
ATATGGACTT TTACAGGTGC ATTAAATGCG GGTGAGATCA AAATTCATGC AAAATTGGGA 
ACAGATTTTA TTTCCAATAA TTGGGAGGAT GGGAACTGGC TGTATTCCGA CGCTGTTAAT 
GCTGACTTTC TTACTGCTGC GAAATACCGT GTTGATGGGA CTGATACAAA ATGGAATATT 
GCGGAAACAG GTGTTTATAA TATTACGATT AACCTTGCAA CAGAGCTCCT AACAGTGCAA 
AAGGTAGATG AAAACAATAT AATCTTACAA AAAAACTCCT TAAATAATAA AGAAGTATCT 
TTAGATGGTA ATGAAGTTTC AGTTTTTCAA AGTGACATAG TTGTTTATCC CAACCCAACT 
TCAGGCCTGT TTTCAATACA AATTAAACGT CCAAAATCTG CAAAGGCTAC TGTATGTATA 
TATAATTTAA ATGGACGAGT TCTACAAAAG CGAAATATTA TTTTTTCAGA AGAACGCCAA 
AGTTTCGAGT TTAATATTAC TGGTGCCACA TTTGGAATAT ACTTGATAAG AGTTGACTGC 
TTAGAGGGCA TGACACAAAA TCTGATTTTG AAAAATTAG 

 

Protein sequence

MKKTPVLILL LILSLVLSLQ KGFSQINPYK APLYWNPYEY NLIKNDYIPE DEWKKNIDWV 
NDNLKSYGYN MICIDGWGDD SNYTQDGYRT THSSNWIHDY KYWADYLKAR GMTLGMYNNP 
LWVNKKAADA GVKIKGTNIP LSTLLNPIEG QEKIFNWVQV NKPGAEQYIK GYVQYYADMG 
VSYLRIDFLA WFQTGADKGD FTYGPARSTQ DYEKALRWIR EACDENKIFL SLVMPELIDN 
AVSENKYGHM IRINEDLGDG GWNRFNNLDR GIRHSWWSQY YNTFDGYTYW SFISGRKKLI 
LDGDFIRLNS LANDNEKKTV ISLHLMAGGP LSIADQYNSI GQDISYYQNE EMLALNKDGF 
VGKPLFTNDP TNESSQVWAG QMSNGDWIIG FFNRENVTKS RTLDFNVSLG FSGNASVRDL 
WTHTNLGSMS SYSINVPAHG CVILKVVPIN PQPDILSGNN YFIKSKANGK TIAYNTQRDS 
LTTNNIDWDK SEQKWLFTFE KNKEYSITSL SDKKSFDVVE QSINDGAKIH TWQYLGLNSQ 
KWDMVPDGNG YYKIINSNSN KALEMDTVRG IVVQSGSIGD SSQLWTLDPI FDHLTLVGPA 
SPTGSWTKPE GTDATDFKES TFGSNIWTFT GYLNLGEIKI HAKAGGFVSG SWTSGSWLQA 
KNSNANFLTA NEYVVGGADN KWNVAAPGLY NIKVNLREKS LDVKKIDYDY MTLVGPGCSI 
GNWVTPEGDS STDFAETAPN SNIWFFKGNL NAGEIKIHVK LESDFIAGNW LDGSWLQAKS 
ANADFLTQTE YLIDDSNDYK WNIEESGYYI VTVDLNVNKI TVQRKYFDYM TLTGPGSPTG 
GWNKPEGDIN TDFIQTSPNS NIWTFTGMLK VGQVKIHAKI GSVFIADNWL DGSWLQAKTN 
NADFRTAAEF IIDSSNDYKW SVAQAGLYKI TVDLTNGLLS VKRLDYDYIT LVGPGSPSGS 
WTKPEGDIAT DLARTTPGSN IWTFTGALNA GEIKIHAKLG TDFISNNWED GNWLYSDAVN 
ADFLTAAKYR VDGTDTKWNI AETGVYNITI NLATELLTVQ KVDENNIILQ KNSLNNKEVS 
LDGNEVSVFQ SDIVVYPNPT SGLFSIQIKR PKSAKATVCI YNLNGRVLQK RNIIFSEERQ 
SFEFNITGAT FGIYLIRVDC LEGMTQNLIL KN