Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3959 |
Symbol | |
ID | 5089912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4728804 |
End bp | 4730222 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743380 |
Product | Outer membrane protein-like protein |
Protein accession | YP_001196288 |
Protein GI | 146301697 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA CAAAAAATAA ATTGAAATAC GTTGTACGAC TGTTTTCTCT CTTATTTTTA TTCGGTTTTT CGACTTCTTA TGGTCAGGAT TTTAATAAAG AGGAACTTAG TTACAGCGAG TTTTTAGGAT ATGTAAAAAA ATACCATCCG CTGGTAAAAC AGGCTAATCT GGAAATAAGC AATGCTCAGG CGGCGCTTAT GGCTGCGCGT GGTGGATTTG ATCCGAAAAT TGAAGTAGAT TACAGTAAAA AAGAATTTAA AGGAACCGAA TATTATTCAT TACTAAACAG CAGTTTCAAA ATCCCGACCT GGTACGGAAT TGAAATTAAA GCGGGTTTTG ATGATACAGA CGGACAATAT TACAATCCGC AGAATCGTAC GCCGGAAGCC GGATTGACTT CTCTGGGAAT CAGTGTTGCA CTGGGACAGG GAATGTTTAT CAATCAGCGT ATGGCTGATG TCAGGGAAGG AAAACTGCAG TTGAAATTAA GCGATGCACA AAGAAAACTA AAAGCAATTG AAGTTTTGTA CAAAGCGAGT GAAGCGTATT TTGAGTGGAG AAAAAGCTAC AATGAAGCTG AACTTTATAA AAGGTATTTA GGTTTTGCAA GCACTCGTTT TCAGGGTGTA AAAAAACTGA TAGAGCTTGG CGATGCGCCT GCAATTGACA GTGTTGAAGC CGGAATTACA GTTAGAAACC GTGAATTAAA CGTTGAAAAC GGAAATTTGA AACTGGCAAA AGCGCAATTG TATCTGTCTA ATTATTTATG GATTGAAAAC GTTCCGGTTG AATTGGGAGA AATGGTAAAA CCCGAAGAAA ACTTAATTCT TACGCTTGAA GGAACACTAA AAACAGATGC TATGATGGTT GATGTTGAAA GTTTAGAATC TCACCCTAAA ATTCAGGCTC TGGAAACTAA AATGGACATG CTTGAAATTG GCAGAAAACT AAAAGCAAAT TCATTGCTTC CAAAATTAAA TGTAGGCTAT AATTACATTT CAGAACCTGC TTATTTTGAT TCTTTTAATG CTGATGATTA TAAGTTTAAT GTAGATTTTA GTATTCCAAT TTTCCTGAGA AAGGAGAGAG GTAGCCTTAA AATAGCCAAA CTTAAAATTC AGGATTTAAA GTTTGATATT GAACAGCAGC GGCTTGAACT GAAAAATAAA ATTAAAGCAC AGCAGACTGA AATTGCCTCT TTAAAAAGAC AAAAAAGAGT GATTGATAAT CTGGTAAAAG ATTATACGAC TATGCTTAAT TCTGAAGAAA AATTATTCTC TTTTGGAGAA AGTTCCATAT TCCTGATTAA TTCAAGAGAA AATAATCTGG TGAGCGCCAA GTTATCTCAG ATAGGAATAG AGAATCAGTT TTATATTTCA AATGCCGAAT TGTATAAGAT TCTGGCAAAT CCGGATTAA
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Protein sequence | MEKTKNKLKY VVRLFSLLFL FGFSTSYGQD FNKEELSYSE FLGYVKKYHP LVKQANLEIS NAQAALMAAR GGFDPKIEVD YSKKEFKGTE YYSLLNSSFK IPTWYGIEIK AGFDDTDGQY YNPQNRTPEA GLTSLGISVA LGQGMFINQR MADVREGKLQ LKLSDAQRKL KAIEVLYKAS EAYFEWRKSY NEAELYKRYL GFASTRFQGV KKLIELGDAP AIDSVEAGIT VRNRELNVEN GNLKLAKAQL YLSNYLWIEN VPVELGEMVK PEENLILTLE GTLKTDAMMV DVESLESHPK IQALETKMDM LEIGRKLKAN SLLPKLNVGY NYISEPAYFD SFNADDYKFN VDFSIPIFLR KERGSLKIAK LKIQDLKFDI EQQRLELKNK IKAQQTEIAS LKRQKRVIDN LVKDYTTMLN SEEKLFSFGE SSIFLINSRE NNLVSAKLSQ IGIENQFYIS NAELYKILAN PD
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