Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3830 |
Symbol | |
ID | 5093741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4537289 |
End bp | 4539409 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644743252 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001196160 |
Protein GI | 146301569 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.417332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATTAA GTATACAGCA TGTCAGTCTT CCTATTGAAG ATCCGGTATT AAAATTCCTT ATCGAGCTTA TTATAATTTT ATGTATTCCT CTTTTACTCA ATAAAATAAA AGTGCCGCAC CTGCTGGGTC TTATTATAGC CGGTGCCGTT ATTGGTCCAA ATGGATTTAA TGTTCTTGCC AGAGACAGCA GTGTAGTGGT GACAGGTACT ACTGGACTGC TCTATATAAT GTTTCTTGCC GGACTTGAGA TAGATATGGG CGATTTTAAA AAAAATAAAT GGAAAAGTAT CACTTTTTCG CTCTATACCT TTATTGTGCC ATTTGCACTG GGGCTTGTGG GTGGTTATTA CATACTCCAT TTTTCGCTTT TAAGCTCGGT ATTATTTGCC AGCCTTTTTT CTTCCCATAC TCTTATTGTA TATCCAATGG TGAGCAAATT AGGGATAGCA AAAAAGCTTG CGGTAAATGT AACGGTAGGC GGCACGATGA TTACAGATGT ACTTTCGCTT GTAGTACTGG CTGTTGTGGT GGGCATGTCA CAGGGAGAAG TTGGAACTTC CTTCTGGGTT AAGCTTTCTG TTTCCATGCT TGTATTTGCT TTAATAGTTC TGCTTCTTTT TCCTGTCTTG GCGCGCTGGT TTTTTAAGAA TGTCGAAGAC AAGATTTCCC AGTATATTTT TGTTATTGTG ATGATTTATC TAGCTGCTTT ATTGGCAGAG CTCGCTGGAA TAGAAGCCAT TATTGGAGCA TTTTTTGCCG GTCTTGCGCT AAACAGGCTG ATACCGCACA GTTCATCACT TATGAACAGG GTAGAATTTG TAGGGAATGC TATTTTTATT CCATTTTTCC TGATTAGTGT TGGTATGTTG ATTGATTTTA ATGCTTTTAT CCAGAGCTGG GAAACACTGG GAGTAGCTGC AGTTATGCTT ACAGCTTCAA TTGGAGGGAA ATACGCGGCA GCTTTTTTAA CGAAAAAGAC TTTTAGATTT ACAAATGATG AAGGCAGTCT TATTTTCGGT ATGAGTGCGG CTTCTGCGGC AGCTACGCTT GCTTCAGTAA TGGTGGGATA TAATATTATC TTATCCGAAA ATGAAGCAGG TGAGCCTGTC AGACTTTTAA ATGAACATGT GCTTAATGGC AGTATTCTGC TTATACTTAT TTCCTGTACT ATTTCGTCAT TTGTGTCAAT GGCAAGCGCT CAAAGGATTG CCGATGCAGA TAAAGAAGAA ACCGCGGCAG GTGCAGGTGA TGAGGAAGAA AAAATTCTGC TGGCTGTAAA TCATGAACAT ACAGTTGAGA AAATGGTTAA TCTGGGGCTT CTCATAAAAG GCAGAAACAA TAAAGACAAA CTTTTTGCAC TTAATGTCAT TAACGAAGAC AAAAGTGAAT CATCTTCAAA AAATGCAGAA AAACTGCTGG GTGCGGCTGT AAATATAGCA TCCTCTGCCG ATGTTAAATT AAATCCGATA ACCCGTCATG ATAATGATGT GATTGCAGGG ATTAATAATG TGGTAAAAGA ACAGAATATT ACTGATTTGA TTATTGGCCT GGAAGAAGAA AAAGGATTTT CTTCATCCTT TATTTATAAT CTTTATAACG GCTACCTGCA GAACAAGAAT ATAAATCTGA TTATTTATCA TGCGGTTCAG CCGGTGTCAA CCATTAAAAA ATATGCTGTG CTTATCCCTG CTGATGCTGA ACTGGAACCG GGATTTTTTC ATTGTTTATT AAGAATTTGG AACATCGGAA AAAATACGGG GGCTAAAATG AGTTTTTATG CAAACCAGAA AACCATTGGT GTATTGAAGA GTATTATAGT AAAGGCAAAT ATTGAAGCTG TTTTTAATCC TGTGACCTCA TGGCAGGAAG CTGAAAATAC TGCGGGCAGT CTGGAAGAAG ACGAAGGTCT TATTATTTTA ATGGCTGACA GGGGTATGCA TTCTTATTTC CCTCAGATGA AAGAAGTGCC AGAAATTTTA AATAAAAAAC TGAGCAGTAA TAACTATATA TTAATTTATC CTTTCACAAA AATTGATAAT ACGGTTATAG AAAAAAGAGC TGTAAGCAAT CTTGATGATT TTGCTGATAT CGGAAAAATT ATCGGCCGAA TTTTTAAGTA G
|
Protein sequence | MLLSIQHVSL PIEDPVLKFL IELIIILCIP LLLNKIKVPH LLGLIIAGAV IGPNGFNVLA RDSSVVVTGT TGLLYIMFLA GLEIDMGDFK KNKWKSITFS LYTFIVPFAL GLVGGYYILH FSLLSSVLFA SLFSSHTLIV YPMVSKLGIA KKLAVNVTVG GTMITDVLSL VVLAVVVGMS QGEVGTSFWV KLSVSMLVFA LIVLLLFPVL ARWFFKNVED KISQYIFVIV MIYLAALLAE LAGIEAIIGA FFAGLALNRL IPHSSSLMNR VEFVGNAIFI PFFLISVGML IDFNAFIQSW ETLGVAAVML TASIGGKYAA AFLTKKTFRF TNDEGSLIFG MSAASAAATL ASVMVGYNII LSENEAGEPV RLLNEHVLNG SILLILISCT ISSFVSMASA QRIADADKEE TAAGAGDEEE KILLAVNHEH TVEKMVNLGL LIKGRNNKDK LFALNVINED KSESSSKNAE KLLGAAVNIA SSADVKLNPI TRHDNDVIAG INNVVKEQNI TDLIIGLEEE KGFSSSFIYN LYNGYLQNKN INLIIYHAVQ PVSTIKKYAV LIPADAELEP GFFHCLLRIW NIGKNTGAKM SFYANQKTIG VLKSIIVKAN IEAVFNPVTS WQEAENTAGS LEEDEGLIIL MADRGMHSYF PQMKEVPEIL NKKLSSNNYI LIYPFTKIDN TVIEKRAVSN LDDFADIGKI IGRIFK
|
| |