| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3760 |
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| Symbol | |
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| ID | 5089792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4456740 |
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| End bp | 4458716 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644743182 |
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| Product | Type IV secretory pathway VirD4 components-like protein |
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| Protein accession | YP_001196090 |
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| Protein GI | 146301499 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.195316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAG GAGAAAATGA ACAGGCACTG AGAAAAATAC TCGATATGAC AAGACTGATG
AGCATCATGG TGCTGCTGCT GCATTTTTAT TATTACTGTT ATGGGGCATT CCGGTTCTGG
GACCTGACAG GAACTTTAGC AGATCAGATT TTAACTTCGG TTTATAAGAC CGGACTGTTT
GGCAGTTTTC ATTTTTCCAA ATGTATTTCG CTGGGGCTGC TTGTGATTTC ACTGCTCGGC
GCCAAGGGAA GAAAGGACGA AAAAAGACAG TTTAAAACGG CTTTTTATTA TACGGCTTTC
GGACTGGCGC TGTATTTTCT GAGTGGTACG GCGCTGCTCT TTTACGGGTC CGAGCCGCTT
CTTGCAGCGC TGTATATAGG GACAACTGTT CTGGGTTTTC TGCTGGTGCT CTCGGGAGGC
ACAATGCTCT CCCGCATTAT TAAAAACAGA CTCCCTGATG CGGATATTTT TAACAGCGAA
AATGAAACCT TTCCCCAGGA AGAACGACTG CTGGAAAATG AATATTCGAT CAACCTTCCG
GCGCGTTATT ACCGCAGGGA CAAAATCCGA AACAGCTGGA TCAACATCAT CAATCCTTTC
CGCGGCCTGC TTGTTTTGGG TACGCCGGGT TCAGGCAAAT CCTATTTTGT AATCCGTCAT
CTCATCACCC AGCATATTGC CAAGGGATTC AGCATGTTTG TCTATGATTT CAAATACGAT
GACCTGTCCA AAATCGTTTA CAATACTTTT GAGAAATACA AACACGCCTA CACAGTGGTG
CCGAAATGTT ACTTCATTAA TTTTGATGCA ATCATGCACC GCTGCAATCC GCTGGATCCG
CAGAGTATGG AAGATATAAC CGATGCCTCG GAATCCGCAC GCACTATCCT TCTGGGGCTC
AACCGGGAGT GGATCAAACG CCAGGGCGAC TTTTTTGTGG AATCGCCGAT CAATTTTTTA
TCGGCCGTGA TCTGGTATCT CAGAAGGTAC AAGAATGGGG AATTCTGCAC CCTGCCGCAC
GTTATTGAAC TCATGCAGGC CGACTATGAC AGCCTCTTTA CCCTGCTGCG CACCGATAAG
GAAATTGAGG TGCTCATCAA CCCTTTTGTC AATGCATATC TTAACGATGC CATGGAACAG
CTCGAAGGAC AGATTGCCTC GGCTAAAATA GCCATGGCCC GGCTTTCTTC CCCCCAGCTC
TATTATGTAT TATCGGGAAA TGATTTTACC CTGGACATTA ATAATCCCCT GGAGCCCAAG
ATTGTCTGCA TGGGAAACAA CCCGCAGAAA ATACAGATTT ACGGCGCTGT TTTATCGCTC
TATGTCAACC GGCTGATCAA ACTGGTCAAC AAAAAAGGAA AGCTCAAATC CAGTCTTATT
TTTGATGAGT TTCCCACTAT TTATCTCAAC AACATGGACA GCCTGATTGC TACGGCCAGA
AGCAACAAAG TGAGCACCTG CCTGGGGATA CAGGATTTCA GCCAGCTCAG AAAAGACTAT
GGGCGCGAAC AGGCCGACGT GATCATGAAC CTCACCGGAA ATATCATATC AGGGCAGGTG
GCAGGGGATA CGGCCAAACA GCTTTCGGAA CGTTTCGGGA AGATCATGCA GGACAGGGAA
AGTATTTCCA TCAACAGTTC GGATGCCTCC ATCAGCCGCT CCAGACAATT GGAAGCCGCC
GTGCCGCCAT CCAAGATTTC ATCGCTCAGT TCAGGGGAAT TTGTGGGCAT GACTGCCGAT
GATCCGCAGT GCCGCATCAA ACTGAAAACC TTTCACTGTG AGATTGTAAA CGACCATGAA
GCGCTGCGCA GGGAAGAGGA AAACTATACG GAAATACCGC CTGTGCGGCA TTTGGATTCC
GGGATGATAC AGCGGAATTT CCAGCAGATC AAGTGTGATG TGCAGGATAT TATTTATACC
GAGATGGAAA GACTTCTCAA TGACCCCGCG CAGCAGCATC TTATTGTAAA GAAGTGA
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| Protein sequence | MQTGENEQAL RKILDMTRLM SIMVLLLHFY YYCYGAFRFW DLTGTLADQI LTSVYKTGLF
GSFHFSKCIS LGLLVISLLG AKGRKDEKRQ FKTAFYYTAF GLALYFLSGT ALLFYGSEPL
LAALYIGTTV LGFLLVLSGG TMLSRIIKNR LPDADIFNSE NETFPQEERL LENEYSINLP
ARYYRRDKIR NSWINIINPF RGLLVLGTPG SGKSYFVIRH LITQHIAKGF SMFVYDFKYD
DLSKIVYNTF EKYKHAYTVV PKCYFINFDA IMHRCNPLDP QSMEDITDAS ESARTILLGL
NREWIKRQGD FFVESPINFL SAVIWYLRRY KNGEFCTLPH VIELMQADYD SLFTLLRTDK
EIEVLINPFV NAYLNDAMEQ LEGQIASAKI AMARLSSPQL YYVLSGNDFT LDINNPLEPK
IVCMGNNPQK IQIYGAVLSL YVNRLIKLVN KKGKLKSSLI FDEFPTIYLN NMDSLIATAR
SNKVSTCLGI QDFSQLRKDY GREQADVIMN LTGNIISGQV AGDTAKQLSE RFGKIMQDRE
SISINSSDAS ISRSRQLEAA VPPSKISSLS SGEFVGMTAD DPQCRIKLKT FHCEIVNDHE
ALRREEENYT EIPPVRHLDS GMIQRNFQQI KCDVQDIIYT EMERLLNDPA QQHLIVKK
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