| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3454 |
|---|
| Symbol | |
|---|
| ID | 5089655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 4120603 |
|---|
| End bp | 4121349 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644742879 |
|---|
| Product | acyl-ACP thioesterase |
|---|
| Protein accession | YP_001195787 |
|---|
| Protein GI | 146301196 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3884] Acyl-ACP thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.604598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAT CTCCCAATTT TACATCAGTT TTAAGCAAAG ACTGGGAAAT TAATTTCACG
CAGTGCACAC CAAACGGCTA CTTAAAATAT ACCGATTTGT GCAATCTTTT ACAATTAACC
GCTGCAGCAC ATTCTGAAGT TGGCGGAATC AGCTTTACCG ATATGCAGGA ATTTGATCAG
GCATGGGTTT TAAGCCGAAT GCGTGTCGAA ATTACAGCAT TACCAAAATG GCAGGATGTT
GTAACTGTAA AAACATGGAT TAACAGTTTA GAAAATTCAC GTTCTGTTCG TGCATTGGAA
ATGTACATAA ACGGAAAAAA GATTGTTGGA AGCGAAACCT ATTGGGCTGT TTTTAACACC
AAAGCACGTC GTCCAGAAGC ATTGGCATTA CCTTTTGAAC ATTTTGAATT GTTCCCTGAA
AAAAGAGCAA CAACAGAAGG TTTTTCTAAA ATAAATATCA ACCACGAAAA AGAAGCTGTA
TTCGAAAAAA CAGTCTATTT ATCCGATTTA GATATTGTAA ACCACGTCAA TAACGTAAAA
TACTTCGAAT GGTGCCTGGA TCATGTCGAT CCAAAAAGAA TCATAAAACA AGAAGTAAAA
AGCTTTGAAA TGAATTTCAT GAAAGAGCTT TCGTTACAAG ATAACGTGGT AATTCACGAA
AGCGAAGACG ACGATCATAG AACAGCGACA TTCAGCATTA CAAAAGACGA CAAAACGTGT
TTTGCTTTGG AGCTGCATTG GAAGTAA
|
|---|
| Protein sequence | MPISPNFTSV LSKDWEINFT QCTPNGYLKY TDLCNLLQLT AAAHSEVGGI SFTDMQEFDQ
AWVLSRMRVE ITALPKWQDV VTVKTWINSL ENSRSVRALE MYINGKKIVG SETYWAVFNT
KARRPEALAL PFEHFELFPE KRATTEGFSK ININHEKEAV FEKTVYLSDL DIVNHVNNVK
YFEWCLDHVD PKRIIKQEVK SFEMNFMKEL SLQDNVVIHE SEDDDHRTAT FSITKDDKTC
FALELHWK
|
|---|
| |