Gene Fjoh_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2864 
Symbol 
ID5090493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp3398973 
End bp3400091 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID644742295 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001195204 
Protein GI146300613 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.020128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGA AAATAGCAGT TTTACCAGGA GACGGAATTG GACCAGAAGT TATTGCACAG 
GCCAAAAAAG CATTATATGC TATTGGCGAA GTGTACAATC ATGAATTTGT TTTTGAAGAA 
GCACTCATGG GTGCGATCGC TATTGACAAA ACTGGAAACC CGCTCCCGGA GCAGACTTTA 
AATCTTTGTT TAAATACTGA TGCTGTTTTG CTTGGTGCTA TTGGAGATCC AAAATACGAT 
AACAACCCAA ATGCAAAAGT TCGTCCGGAG CAAGGTTTGT TAAAACTTCG AAAAGAACTT 
GGTTTGTTTG CCAATATTCG TCCTATTAAA CCATTTAAGG CTTTAATTGA TGCTTCTCCT 
TTAAAAAGAG AGATTATTGA AGGAGCAGAT TTTACAATTT TCAGAGAATT AACCGGCGGT 
GCTTATTTTG GTACAAAAAC ATTAAATGAT GAAGGCACAC ATGCTTCGGA TTTATGTGAG 
TATTCTGAAG AAGAAATAAC GAGAATTGCA CATTTAGCTT TTAAATCGGC ACAAAACCGA 
CGCAAGAAGT TAACTATGGT AGACAAAGCA AATGTTTTGG AAACTTCCAG ATTATGGAGA 
AAAGTGGTTC AAAAAGTAGG CGAAAGCTAT CCAGATGTAA TTTTGGACTT TTTATTTGTA 
GATAACGCAG CAATGCAGCT GATTTTGAAT CCAAAACAAT TTGATGTGAT TTTAACTGAG 
AATTTATTTG GAGATATTTT ATCTGATGAA GCCAGCGTAA TTACAGGATC TATTGGTTTA 
CTGCCATCAA TATCTTTAGG AGAAAAAAAT GCTTTGTTTG AGCCAATTCA TGGTTCATAT 
CCACAAGCAA AAGGAAAAAA TATTGCCAAT CCAATTGCTT CGATTTTAGC TGCAGGACTT 
TTGTTAGAAC ATTTTGGATT AACTAAAGAA GCGAATGTAG TTTTTCAGGC AGTTAAAAAA 
GCAATTGAAT ATGAAGTTGT TACTGTTGAT TTAAAACCAG ATTCAAAATT TGGTACAAAT 
GAAGTAGGGG AGTTTGTTTC CAATTTCATT TTCAGCAAAG ATGACTTATT ATATTTTAAT 
AATGATAATG TTTCGATTGG TCAATCGACA ATAGTTTAG
 
Protein sequence
MNLKIAVLPG DGIGPEVIAQ AKKALYAIGE VYNHEFVFEE ALMGAIAIDK TGNPLPEQTL 
NLCLNTDAVL LGAIGDPKYD NNPNAKVRPE QGLLKLRKEL GLFANIRPIK PFKALIDASP 
LKREIIEGAD FTIFRELTGG AYFGTKTLND EGTHASDLCE YSEEEITRIA HLAFKSAQNR 
RKKLTMVDKA NVLETSRLWR KVVQKVGESY PDVILDFLFV DNAAMQLILN PKQFDVILTE 
NLFGDILSDE ASVITGSIGL LPSISLGEKN ALFEPIHGSY PQAKGKNIAN PIASILAAGL 
LLEHFGLTKE ANVVFQAVKK AIEYEVVTVD LKPDSKFGTN EVGEFVSNFI FSKDDLLYFN 
NDNVSIGQST IV