Gene Fjoh_2775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2775 
Symbol 
ID5093220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand+ 
Start bp3308508 
End bp3309161 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content29% 
IMG OID644742205 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_001195116 
Protein GI146300525 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.115989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCT TTAATTTTCA TACACATCAA TTTACAAATC AATCTAATAT ACTAGAATTG 
GTAAATCAAT ATCCGCAGGA ATTTGATGAA TCGATTCCGT TTTATTCAAT CGGAATTCAT 
CCGTGGTATA TTAAAGAAGA TCAAATTGAT TTAGAACTGA AAATTATTGA AGATAAACTG 
CAAGCCGAAA ATTGCCTGGC TGTTGGTGAA TGCGGTTTAG ATAAACGAAT CGAAATTCCG 
TTAGAACAGC AGATTATAGT TTTTGAAAAA CAATTGGCTC TAGCCGAAAA ATATAAGAAA 
CCTGTAGTAA TTCATTGTGT TGCTGCTTTT CAGGAAATTA AGGCAATTAA AAAGAAATTA 
AAAATTTCTG TTCCAATGAT CATTCACGGT TTTTCTAAAA ATAAACAACT TGCAGAACAA 
TTAATTAAAG ATGGATTTTA TCTTTCGTTT GGGAAATATC TATTAAAGAA TCCCGATTTA 
AAAATCGTTT TTGAGAGTGT TCCAAACGAT CGTTTCTTTT TAGAAACCGA TACAATTGAA 
GAAGATATCC AGCAGGTTTA TAATATAGCA TCAGAATATA AAAACATAAC AATAAAAGAA 
TTACAGGATA TTATTTCAAG TAATTGTAAA ATTGTATTTG AAAGTAAAAT GTGA
 
Protein sequence
MEFFNFHTHQ FTNQSNILEL VNQYPQEFDE SIPFYSIGIH PWYIKEDQID LELKIIEDKL 
QAENCLAVGE CGLDKRIEIP LEQQIIVFEK QLALAEKYKK PVVIHCVAAF QEIKAIKKKL 
KISVPMIIHG FSKNKQLAEQ LIKDGFYLSF GKYLLKNPDL KIVFESVPND RFFLETDTIE 
EDIQQVYNIA SEYKNITIKE LQDIISSNCK IVFESKM