Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2318 |
Symbol | |
ID | 5090673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 2786355 |
End bp | 2786906 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 644741746 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001194664 |
Protein GI | 146300073 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAT TTATAAAGTT TGACATTAAC ACCATTTGCT CACTTTATCT AAAACAAAAT CTGGAACAAA ATAATATAAA TTTTACCAGT CTGGGTTTTG GAGAAATTGA AATTGATGAT AATATTGATG CTGAAGCACT CGAAACTTTA AAAAATAATC TAAGTCCCTG TGGATTTGAA ATAGTTGAAA ATCAGAAAAG TGTATTAGTT CAAAAAATAA AAGACGCCAT AATCGAACTT GTTTTTATGG AAGACAGCAA CAATTATAAA AGTTCTGTAT TTCTTGCCGA AAAACTAAAC CATAGTTATG GTTATTTATC GAATGTGTTT TCAGAAGTTA CCTATTCTTC CATCGAAAAT TTCATCATTT TACAGAAAAT TGAGAGAGCA AAACAGTTAA TTATTATCAA CGAAATGAGT TTAACTGAAA TCGCATTCTT ACTAAATTAT TCTAGTGTTG CACATTTAAG CACACAATTT AAAAATACGA CCGGAATCAC GCCGTCGGCA TTTCAAAGAA TAATTAAGAA ACGCAGAGAG AATCTAAAAT AA
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Protein sequence | MKLFIKFDIN TICSLYLKQN LEQNNINFTS LGFGEIEIDD NIDAEALETL KNNLSPCGFE IVENQKSVLV QKIKDAIIEL VFMEDSNNYK SSVFLAEKLN HSYGYLSNVF SEVTYSSIEN FIILQKIERA KQLIIINEMS LTEIAFLLNY SSVAHLSTQF KNTTGITPSA FQRIIKKRRE NLK
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