Gene Fjoh_1875 details

Gene Information

• Locus tag: Fjoh_1875
• ID: 5090402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 2158766
• End bp: 2160811
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 644741290
• Product: TonB-dependent receptor
• Protein accession: YP_001194226
• Protein GI: 146299635
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGTAT GTAAACAAAG GCCGTTAAGC CTAATACATT GTGGATTTTG TTTTTTGCTT 
TGGATTTTGT TCTCAAATCC AATTTTGGCA CAAAACCATC CCAAATCTAA AGAAGTTGAT 
TCTTTAAAAC CGCTTCCGTT AAACGAAGTT ATTCTAACCG CAAGCAAACG CGAGTTCAGG 
ATAGAGTCGC CTATGCCTGT CCAGATTTTA TCTGGCAAAC AGCTCGAAAA CCTTAACAGT 
CTTTCTATTG CCGATGCGGT TCGTTATTTT TCAGGCGTAC AGTTAAAAGA TTACGGCGGA 
ATTGGCGGTT TAAAAACCAT TAACGTCCGC AGTTTAGGAA GCGCTCACAC AGCAGTTTTT 
TACGATGGAA TGACGGTTGG AAATGCTCAA AACGGACAGG TTGATTTAGG AAAATATTCG 
CTTGATAATA TTGAAGCCAT CGAACTTTAT AATGGTCAAA AGTCTACTAT TTTTCAGCCG 
GCACGCGGGT TTTTCTCTTC TAATACTTTA TTCCTAAAAT CGAAAGTTCC CGTTTTTGAA 
TCGGGTAAAA ATGCAAATGT CAGAGCTTCT TTTAAAACCG GATCTTTCGG ACTGGTGAAT 
CCTTCTGTTC TTTATCAGCA AAAAATAACT TCTAAAACAG CTCTTTCATC AAATATCGAG 
TGGACGAAAG CCGATGGAAA GTACAAATAC AGGTATCAGA AAAAAGACGG CTATGACACA 
ACAGCCGTTC GTCAAAATGG AGATATAACC GCTCTTCGCG CTGAATTAAA CCTAAATACA 
AAGTTTGGAA CAAACGGACA AGCCAATCTT AAAGCCTATT ATTACGATTC TGAAAGAGGT 
CTTCCTGGCG CTATTTTAGC CAATCGGTAC GAATATGTAC AGCGTCAATG GGATCGGAAT 
TTCTTTATTC ATGCTTCGGT ACAAAATTCT TTTTTCGAAA AACACGAAAT GCTGGCAAAT 
GTAAAATTCA GCCGTGATTA CAGCCGTTAC ATCGACCCGG ATTATAAAAC TCTTGAAGGG 
GCATTAGACA ATAAATATTA CCAAAACGAA TTTTACGCTT CGATTGTTAA TCTCTACAAC 
ATAAAAGACT GGTGGAAAAT GTCTTTCGCT GCCGATCTTT CTATAAATAC ACTCGATGCT 
AATTTATACC ATTTCCCCTA TCCTACCCGA TATTCTTATT TAGGAGCACT TTCGAGCGAA 
ATGCATTGGA AACGTCTGGA TATTCAGGCA AATTTACTGG GCGCTTATAT TGATGAACAA 
GTCAAATATT ACCAGCAGGG AGACAGCCAG CATGTTTTTT GTCCGGTTGT ATCAGCTTCT 
TTTCAGCCAT TTGATGTAAA GAATTTTAGA ATCAGAGCAT TTTATAAAGA ATCTTTCCGA 
ATGCCGACTT TTAATGATTT GTATTACACT TTTATCGGAA ACAGCTTTTT GCGCCCGGAA 
TTTACAACTC AATATGATTT TGGAACCACT TATCTTATCG AACCTAAAAA GTTTTTACAA 
TCGGCTTCAT TTCAGGCAGA TGTTTATTAC AACCGCGTAA AAGACAAAAT TGTGGCAATG 
CCGTCTTCTA ATCTTTTTAG ATGGACGATG ATGAATTTGG GAGAAGTTGA TATTCGCGGT 
TTAGAAATCA ATACCAATTT GGTTTTTAAA TTTCCTGAAC AAATATTTTT AGACTTAGGC 
CTTAGTTATA CCTATCAGCA GGCAATCGAT ATTACGCCAA AAGGCACTAC TTATGGCGAT 
CAAATTCCTT ACACGCCTAG AAACAGCGGT ACTTTAACTT CTTCTATTAA CTGGAAAAAC 
TGGAATTTAA ACTACAGTTT TATTTATACA GGCGAAAGAT ACAGCCAGAA AGCCAATATT 
CCTGTCAATT ATGTAAAACC TTGGTACACG AGCGACATGG CGCTTATCTG GAACGGAAAA 
ATTGAAAAAC TTCCTGTAAA AATAAGCGGT GAGGTCAACA ATTTATTCAA TCAATATTAT 
GATGTCGTAC TCAATTTCCC AATGCCGGGA AGAAATTACC GATTAAGTAT GTCTATAAAT 
CTTTAA 

 

Protein sequence

MHVCKQRPLS LIHCGFCFLL WILFSNPILA QNHPKSKEVD SLKPLPLNEV ILTASKREFR 
IESPMPVQIL SGKQLENLNS LSIADAVRYF SGVQLKDYGG IGGLKTINVR SLGSAHTAVF 
YDGMTVGNAQ NGQVDLGKYS LDNIEAIELY NGQKSTIFQP ARGFFSSNTL FLKSKVPVFE 
SGKNANVRAS FKTGSFGLVN PSVLYQQKIT SKTALSSNIE WTKADGKYKY RYQKKDGYDT 
TAVRQNGDIT ALRAELNLNT KFGTNGQANL KAYYYDSERG LPGAILANRY EYVQRQWDRN 
FFIHASVQNS FFEKHEMLAN VKFSRDYSRY IDPDYKTLEG ALDNKYYQNE FYASIVNLYN 
IKDWWKMSFA ADLSINTLDA NLYHFPYPTR YSYLGALSSE MHWKRLDIQA NLLGAYIDEQ 
VKYYQQGDSQ HVFCPVVSAS FQPFDVKNFR IRAFYKESFR MPTFNDLYYT FIGNSFLRPE 
FTTQYDFGTT YLIEPKKFLQ SASFQADVYY NRVKDKIVAM PSSNLFRWTM MNLGEVDIRG 
LEINTNLVFK FPEQIFLDLG LSYTYQQAID ITPKGTTYGD QIPYTPRNSG TLTSSINWKN 
WNLNYSFIYT GERYSQKANI PVNYVKPWYT SDMALIWNGK IEKLPVKISG EVNNLFNQYY 
DVVLNFPMPG RNYRLSMSIN L