Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1754 |
Symbol | |
ID | 5091821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 2028134 |
End bp | 2029189 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644741165 |
Product | RNA procession exonuclease-like protein |
Protein accession | YP_001194105 |
Protein GI | 146299514 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC CACTTTTAGC TTTTAATGAT AAAGGTATTT ACTGCCAGCA GGCTGATGTT TATCTTGATC CGTGGCGTCC TGTAAAGAAC GCCATAATTA CGCACGGACA TTCTGATCAC GCACGCTGGG GACATCAAAA TTACATTACG CATCATACCA ACATTCCCAT AATACGCCAT CGTTTGGGCG AAATAAATGT AACCGGAAAA GAATGGGGAG AAACCTTTGT TATCAATAAT GTAAAATTTT CACTTCATCC TGCCGGACAT ATTATTGGAA GTTCACAGAT TAGAGTAGAA CACAAAGGCG AAGTCTGGGT TTTTACCGGA GATTATAAAA CAGAAGACGA CGGAATTTCA ACGCCGTATG AAGTCGTAAA ATGCGACACT TTTATAACCG AATGCACTTT CGGATTACCT GCTTTTAACT GGACACCGCA GGCAGAAGTT ATTTCGGAAA TCAATAATTG GTGGGCAGAA AATAAAGCAG AAGGCAGAAC TTCAATTTTG TTTGGATATT CTTTAGGAAA AGCACAAAGA CTTTTAAAAT ATTTAGATAC TGATATTGGA AAAATATACA CGCACGGCGC CATCGAAAAT ATGACAAATG TTTTACGCCC AATGGTTTAT TTTCCTCCAA CTGAATTAAT TACCAGAGAA ACCAAAAGAG AAGCGCTTTT AGGAAATATT GTTCTCGCTC CTCCAAGCGC ACACGGAAGC ATCTGGATTA GAAAAATGAC ACCTTTTGTA ACCGGTTCAG CAAGCGGATG GATGGCTTTT CGCGGTGCAA GACGCCGACG TGCTATTGAC AAAGGTTTCG TTTTAAGTGA TCACTGCGAC TGGCATTCTC TATTAGAAAG TGTGAAAGCA ACAGGCGCAG AACGCGTAAT CTGTACGCAC GGTTATACCG ATATTTTTGC CAAATACTTA AGGGAATTAG GTTACGATGC CAGAACTGAA AAAACACAAT ACGAAGGCGA AACTGCCGAG ATGGAAAAAG AGGATAATGA AGCAGAAATA GATCAAAATG AAACTTCGGT TATTTCTGAA AAGTAA
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Protein sequence | MKIPLLAFND KGIYCQQADV YLDPWRPVKN AIITHGHSDH ARWGHQNYIT HHTNIPIIRH RLGEINVTGK EWGETFVINN VKFSLHPAGH IIGSSQIRVE HKGEVWVFTG DYKTEDDGIS TPYEVVKCDT FITECTFGLP AFNWTPQAEV ISEINNWWAE NKAEGRTSIL FGYSLGKAQR LLKYLDTDIG KIYTHGAIEN MTNVLRPMVY FPPTELITRE TKREALLGNI VLAPPSAHGS IWIRKMTPFV TGSASGWMAF RGARRRRAID KGFVLSDHCD WHSLLESVKA TGAERVICTH GYTDIFAKYL RELGYDARTE KTQYEGETAE MEKEDNEAEI DQNETSVISE K
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