| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1231 |
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| Symbol | |
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| ID | 5090031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 1402120 |
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| End bp | 1404879 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644740633 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_001193582 |
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| Protein GI | 146298991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.218309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ACCTACTTTT TCTGACTATG CTTCTAATTG CTTTTCAAAC ATGGTCACAG
CAGATTAATG AAGCAAGCGG ATGGCTTGAA TCAGTATTTG TAAAATGGCA GCCCGTAAGC
AATGCCCAAA CCTATAATGT GTATTATACC GGTGGCGGAC TTGTAGATCA AAAAATAGAC
AACGAACTTA TTAGAAGTTA CGGAACTTAT TTTCGCGCGG ACATTCCGGG TTTAAAAGCC
GGATCTTATA CAGTAAAAAT TAAACCGGTT ATTTCTGGTG TTGAAGGAAC TGGAACCACA
ACAAGTTCTT TAACGGTTAA AGCTCATGAC CGATCTGGAT TTGCGTTTGC AAATTCACGC
ATTCCCGGCG CATACAATGC AGATGGAACG CCAAAAAGCA ACGCAGTAAT TCTTTACATT
ACACAGCAAA CCAAAAACAC AGTTTCTTTA ACGGTGACTG GCGCATCAGC AAACCCATGT
GTAGGATTAC AAACAATTCT TGACGGTTAT AAAAAAGGGA AAGACACAAG ACCTTTAATT
ATTCGTCTGG TTGGTCAAAT TACTGATTTA TCGTATATGA TGAATGGTGA TCTTGTAATT
GAGAACAACA ATAATGCTGC AAGCTATATC ACAATGGAAG GAATTGGAAA CGATGCTACA
GCAGAGGGAT GGGGAATTAG GGTTAAAAAC GCGTCAAACA TAGAAATCCG AAACATCGGA
ATTATGAATG TAGACAGTGG CGAAGGCGAC AATATTGGAT TACAGCAGGA CAACGATTAT
GTATGGGTTC ACAATTGTGA TTTCTTTTAC GGAAAACCTG GAAGCGATGC TGACCAAATA
AAAGGTGACG GAGCTTTAGA CTGTAAAAAA TCAACTTATG TAACCTTTTC ATACAATCAC
TTTTGGGATA ATGGAAAAAG CAATCTTTTG GGTTTAAGCG AAGGAACTAC CGAAGGTTTA
TTTATAACTT ATCACCACAA CTGGTATGAC CATTCAGATT CTCGTCATCC AAGAATTCGT
TATTATTCAG CTCACGTTTA TAATAATTAT TACGATGGTA ACTCTAAATA CGGTGTAGGA
TCTACATTAG GTTCTTCGGT ATTTGTAGAA GCAAACTTTT TTAGAAATTG TAAATATCCT
ATGCTGACTT CAATGCAGGG AACTGATGTT TACAATGGCG CAACAGGAAC TTTTTCAAGT
GAAGACGGCG GTACAATTAA AGCCTACAAT AATACTATGA GCGGACAAAA CCGTTTTGTT
GGGTATAATG CTACAACGTA TCCTGTAGAA TTTGACGCTT ATGTTGCGGC AACAAGAAAT
GAAACTATCA GCAGTACTAT TAAATCAAAA AAAGGAGCAA AAACGTATAA TAACTTTGAT
ACCAATTCGA GTGTAATGTA TACTTATACT CCTGAAAGTC CTGAAAATGC AAAAACAACA
GTTATGCAAT ATGCAGGTCG TGTTTCTGGC GGTGATTTTC AATGGACATT TAACAATGCT
GTAGATGATA CTGCCGATGG CGTAAACATA GGTTTAAGAG ATGCATTAAA TGCTTACCAG
ACTAGTTTAG TTTCTATACA AGGCGGAACA AATCCTCCGG CCGGAAATCA AACTTTAACC
TCAACTTCAA ATAATAACCA AACTGTTACA AGCGGTACAG CAATTGGAAC AATCGTTTTT
ACATGGGGAG GTGACGCAAC AGATGCAACA GTGACAGGAC TGCCAGCATC CGGATTATCA
TTTGTAAAAA ATACAACAGC AAAAACAATC ACAATTACAG GAACTCCAAC TGCCGCAGTA
ACGTATTCTA TTGCTACAAC GGGTTCAGCT GGAACTCCGG CAACGGGAAC TGGAACTATT
ACGGTTAATG CTGCGGGAAC TCAAACGCTC ACATCGACTA ACAATAACAG CCAGACTGTT
GCCAGCGGAA CTGCAATAAA TTCAATTGTA TTTACTTGGG GAGGCACTGC TGCAGATGCT
GCTGTAACTG GTTTGCCGGC TTCCGGCATC AGCTTTGTGA AAAATACTTC GGCTAAAACC
ATTACGATTA CCGGAACACC TACGGCAACG GTTTCTTATT CTATTACAAC AACCGGAACA
GGAACTGCAG CAACAGGTTC AGGAACCATT ACAGTAACTA CCGGCAATCC TGCCGGAGAT
GAAATACACA ATTTTACAAC ATCGGGCAAA ACAAGTGATT TCTATACCAT AACGGGTAAT
CTTTCTACCA CTAAAGGAAC TGTTACTTAC AATGGTTTGA CTCTTACACA ATGTTTAAAA
ATAGAATCTG CTACAAGTAT TACTTTTACA ACGACTCAGG CCAGCACACT GACTTTAGTT
TTTGTAGAAG CTGCAGGTAC AATAAAAGTT GATAATGTAG ATAAAACAGC TTCAAATGGA
ATTGTGACGG TATCACTTGC GGCAGGAAAT CATACAATAG CCAAAAAAGA TACTTCAAAC
CTATTCTACA TGGTTACGGC TTACAATACT GCAACGCTTA AAACGGTTCA CCCAGAATCT
CTGGATACAG CAAGCTCTAA ACCATTTTTA TATCCAAATC CAGTATCTGG AACGTTATAC
TTATCTGATC AAAATCAGAA AGTTGAAAAG GTACAGATTT ACAATGTTTT AGGAGTTTTA
GTCAAAACAT CTCAAAAAGG AAATGAATCT ATCGATTTGG GCAGTTTAGC TTCTGGAACT
TATCTAGCAA AAATATTTAC TACAGATGGT TCGATCAGCC AGACAATTGT AAAAAAATAG
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| Protein sequence | MKKNLLFLTM LLIAFQTWSQ QINEASGWLE SVFVKWQPVS NAQTYNVYYT GGGLVDQKID
NELIRSYGTY FRADIPGLKA GSYTVKIKPV ISGVEGTGTT TSSLTVKAHD RSGFAFANSR
IPGAYNADGT PKSNAVILYI TQQTKNTVSL TVTGASANPC VGLQTILDGY KKGKDTRPLI
IRLVGQITDL SYMMNGDLVI ENNNNAASYI TMEGIGNDAT AEGWGIRVKN ASNIEIRNIG
IMNVDSGEGD NIGLQQDNDY VWVHNCDFFY GKPGSDADQI KGDGALDCKK STYVTFSYNH
FWDNGKSNLL GLSEGTTEGL FITYHHNWYD HSDSRHPRIR YYSAHVYNNY YDGNSKYGVG
STLGSSVFVE ANFFRNCKYP MLTSMQGTDV YNGATGTFSS EDGGTIKAYN NTMSGQNRFV
GYNATTYPVE FDAYVAATRN ETISSTIKSK KGAKTYNNFD TNSSVMYTYT PESPENAKTT
VMQYAGRVSG GDFQWTFNNA VDDTADGVNI GLRDALNAYQ TSLVSIQGGT NPPAGNQTLT
STSNNNQTVT SGTAIGTIVF TWGGDATDAT VTGLPASGLS FVKNTTAKTI TITGTPTAAV
TYSIATTGSA GTPATGTGTI TVNAAGTQTL TSTNNNSQTV ASGTAINSIV FTWGGTAADA
AVTGLPASGI SFVKNTSAKT ITITGTPTAT VSYSITTTGT GTAATGSGTI TVTTGNPAGD
EIHNFTTSGK TSDFYTITGN LSTTKGTVTY NGLTLTQCLK IESATSITFT TTQASTLTLV
FVEAAGTIKV DNVDKTASNG IVTVSLAAGN HTIAKKDTSN LFYMVTAYNT ATLKTVHPES
LDTASSKPFL YPNPVSGTLY LSDQNQKVEK VQIYNVLGVL VKTSQKGNES IDLGSLASGT
YLAKIFTTDG SISQTIVKK
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