Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0591 |
Symbol | |
ID | 5090897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 630187 |
End bp | 631470 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644739990 |
Product | major facilitator transporter |
Protein accession | YP_001192945 |
Protein GI | 146298354 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.584321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGA TTAAATCGAA CAAACCTGAT CCGTATCAGG CATTGCGTTA CAGAGAATTC AACGTATTTT TATTATTGCG TTTTGCGATG GTTTTTGCCT GGTCGATGCA GTTTATTGTA ATCGAATGGG AAGTTTACAG CTTAACTAAA AATCCGCTTT CGCTTGGAAT TATTGGTTTA ATGGAAGTTA TTCCGGCTGT TGGAATGGCA TTGTTTGCAG GACATATTGT AGACCAGAAA GAAAAGAAAG GATTATTGGT AAAATGTATT TTAGGATTCT CGATAATCAG TTTTGGTCTA TTCTTACTGA CTTGGCCAAA AGTTGTTGGC GGCTGGTCTT CAAATATAAT TCTATATTCA ATTTACGCTT TAGTATTTTT TGGAGGCTTG GTTCGTGCTT TTATGGGACC AACTATCTTC TCTCTTTTAT CTTTAATTAT TCCTAAAAAA GTATATCCAA ATGCCGCAAC CTGGAGCAGT TCGGTTTGGC AGATTGGAGC TGTAATGGGA CCAGCATTGG CAGGATTCTC AATTAACTGG ATTGGCGTTC ACTGGTCAAT GTGTTTGGTT TTCGGATTCT CAATTCTTTC CTTAATTGCT TTATCGCAAA TCAGTGCAAA ACCAATCATC AATCCGAAGA TTGGAGAATC AATTAAAGAC AGCCTTACAG AAGGTTTAAC ATTTGTATTT AAAAACAAGA TTGTTTTAGG TGCTTTATCT CTTGATATGA TTGCTGTACT TTTTGGAGGA GCCGTTGCAT TACTGCCTGT TTTTGCTCAG GATATTTTAA AAGTAGGTTC TGAAGGCTTC GGAATTTTAA GAGCTGCTCC TGCTGTGGGC GCTTTTATTA CAATGATTGT TTCGGCTTAT GTGCCTCTAT ATAAAAATGC AGGAAAGAAA CTTCTAATTG CCATATTTGT TTTTGGATTA TCAATCATTC TATTTGGTCT TTCAACTTAT TTCTGGCTTT CTGTTTTTGC TTTATTTTTA AGCGGATTGG CAGATGGAAT TTCGGTAGTA ATCCGTCAAA CGATTTTACA GCTTAAAACT CCGGATCATA TGCGCGGACG TGTTGGCGCT GTAAATTCAA TTTTTGTTGG ATCTTCTAAT GAACTAGGTG CTTTTGAAAG CGGTGCAACA GCTAAATTAA TGGGCGCTGT AACATCGGTT GTTTTTGGTG GAAGTGTTAC ACTTTTAACT GTTGTTTTCA CTGCATTAAA ATCGCCGACT TTTAGAAATT TAGATTTGAA AAGAGATATG GATGAACATC ATAAATTGGA ATAG
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Protein sequence | MEEIKSNKPD PYQALRYREF NVFLLLRFAM VFAWSMQFIV IEWEVYSLTK NPLSLGIIGL MEVIPAVGMA LFAGHIVDQK EKKGLLVKCI LGFSIISFGL FLLTWPKVVG GWSSNIILYS IYALVFFGGL VRAFMGPTIF SLLSLIIPKK VYPNAATWSS SVWQIGAVMG PALAGFSINW IGVHWSMCLV FGFSILSLIA LSQISAKPII NPKIGESIKD SLTEGLTFVF KNKIVLGALS LDMIAVLFGG AVALLPVFAQ DILKVGSEGF GILRAAPAVG AFITMIVSAY VPLYKNAGKK LLIAIFVFGL SIILFGLSTY FWLSVFALFL SGLADGISVV IRQTILQLKT PDHMRGRVGA VNSIFVGSSN ELGAFESGAT AKLMGAVTSV VFGGSVTLLT VVFTALKSPT FRNLDLKRDM DEHHKLE
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