| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0581 |
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| Symbol | |
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| ID | 5090887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 618225 |
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| End bp | 620591 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644739980 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001192935 |
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| Protein GI | 146298344 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.843516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG CTGTCCAAGT TGGATTTTGG GAAAAATTAG CCCGAATCAT ACTTAAAAAC
AGAATTACGA TTCTGGTTAT ACTTTCTGCT TTAACTATTT TCTTTGGTTA TCAGTGGAAG
AATCTTTCTA TGACTTATAC AGAAGCTAAC CTGCTTCCAA AAGATCATAT TGCAAATAAA
GATTATCAAA AATTTCTAGA CAAATTTGGT GAAGAAGGAA ACCTAATTGT TATTGGTTTT
AAAGACCCTA AATTCTTTAC ACCAAAGAAT TATGCTGCCT GGACTGAATT AATGAATGGT
TTAAAAAAAG CCAAAGAAGT TGATTTAGTA ATTTCTCTAA ATGATTTAAA AAAGCTTGAA
AAAGACACTG TAAATCAAAA GTTTGTTTTA GCACCGTTTA TTGACGAAAA CAAAGTACTT
GACGCAGCTT ATTTAAAAAG TGTTCAATAC GATTTGTTTC ACAATCTGCC TTTTTATGAA
GGTTTGTTGT TTAACAAAGA AAGCGGAAGT GTACGTTCTG CAATTTACAT GAACAAAGCG
CTGGTAAATA CTGCTGAAAG AAAGACTTTT ATCTTAAATG ATTTAGTTCC GAAAATCGAT
AAATTCGAAA AAACAACCGG AATTGATCTT AAAGTTTCTG GAATGCCTTA CATCCGTACG
ATTAATGCGG ATAACATGAA AGGCGAAATC GGACTTTTTA TTGGAGCGTC TTTATTGACT
GTTTCTTTAA TTTTCTTTTT CTTTTTCCGT TCGTTCAGAG CTACGTTTAT TTCAATCTGT
ATTTTGATTG TCGGCGTAAC GTGGTCGTTT GGAACACTTG GATTATTTGG TTATAAAATC
ACGATTTTAA CAGCAATTAT TCCGCCGCTG ATTATCGTAA TCGGAATCAC AAACTGTATT
TTCCTGATTA ATAAATACCA GCAGGAAATT AAACTGCATA ACAATCAGGC AAAAGCATTA
CAGCGTGTTA TTTCAAAAAT TGGGCATTCG ACTTTTATGA CCAATTTAAC TGCTGCAATT
GGTTTTGCAA CCTTGATGAT TACTGGAAAC GAACTGCTTT TTGAGTTTGG ATTAGTAACT
TCTATCAACG TACTTTCTGT TTATACTTTG ACACTTTTTA TTGTGCCTAT TATTTACAGT
TTTATGCCTT TGCCAAAAGC AAAACATTTA TACCATTTAG ACAAAACTTA CATTTCGACA
CTTTTAAATA CAGTAACAAC TATCGTTAAA GGAAAAAAGA CAATTGTTTA CTGCATTTAT
GCTGTTCTGT TTCTGGTAAG TTTGAATGGA ATCAGACAAA TGAAAGTTTC AGGAAGTTTG
ATTGGTGAAA TGCCAAAAAG CGCTTCTTTC TTTAAAGATA TTTTATTTTA CGAAAAAGAA
TTCAACGGTG TTATGCCTCT TGAAATCATG ATTGACACCA AAAAGAAAAA AGGTGTCATG
AAACCGGCGA CCATTCGTAA AATGGATGAA TTGCAAAACA CTATTTCTGA AATTCCAGAA
TTGGCGAAAC CAGTTTCTGT TGTCAATTTG GTTAAATATG CAAAACAGGC TTTCTACAAC
GGAAACCCTG AATATTATCA ATTGCCGACT TCTCAGGAAC AGACTTTTAT TTTGGGTTAT
GCTAAAAATG CAACCAAAAA CAGTAAAGAG AATTTAATGA AAGCTTACGT TGATTCAACC
GGACAATATG CGCGAATCAC GACTTTTATG AAAGATATTG GAACAGATGA AATGGCAAAA
GTAGAAGGAA AACTTCGCAA AAAAATTGAT GAAATTTTCC CGAAAGACCG TTATGAAGTT
ACAATTACCG GAAAAGCTTT AGTTTTCCAG AAAGGAACAA CTTATCTGGC GCACAACTTA
ATCGAGTCAT TATTGTTTGC GATTTTGACT ATTGCGATCT TGATGCTGTA TTTATTCCGT
TCGTTCAAAA TGGTAGCAGC TTCTTTGATT ACAAACATTT TACCGCTTTG CATCACTTCG
GGATTAATGG GTTATTTCGG AATCCCGCTA AAACCTTCAA CGATTTTGGT ATTCAGTATC
GCTTTCGGAA TCTCGGTTGA TAATGCTATT CAGTTTATGG CGAAATACAA AGATGAACTG
ACTCAAAATA AAGGAAAAGT AAAGAAATCT GTTTTTAGCG CTTTAAGAGA AACCGGAGTA
AGTACATTCT ACACTTCAAT CGTGTTGATC CTAGGTTTTG CGACTTTTAC GTTATCAAGC
TTCAGCGGAA CAATTGCGTT AGGAGGATTA ATTTCTTGTA CTTTGGTTTT TGCAATGTTT
GCTAACTTGG TGGTATTGCC TTCGCTGGTT TTAACTTTTG AGAAGAAGAA AACTAAAAAA
GAGGAATTGG AGAATTTGGA GAAGTAA
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| Protein sequence | MKNAVQVGFW EKLARIILKN RITILVILSA LTIFFGYQWK NLSMTYTEAN LLPKDHIANK
DYQKFLDKFG EEGNLIVIGF KDPKFFTPKN YAAWTELMNG LKKAKEVDLV ISLNDLKKLE
KDTVNQKFVL APFIDENKVL DAAYLKSVQY DLFHNLPFYE GLLFNKESGS VRSAIYMNKA
LVNTAERKTF ILNDLVPKID KFEKTTGIDL KVSGMPYIRT INADNMKGEI GLFIGASLLT
VSLIFFFFFR SFRATFISIC ILIVGVTWSF GTLGLFGYKI TILTAIIPPL IIVIGITNCI
FLINKYQQEI KLHNNQAKAL QRVISKIGHS TFMTNLTAAI GFATLMITGN ELLFEFGLVT
SINVLSVYTL TLFIVPIIYS FMPLPKAKHL YHLDKTYIST LLNTVTTIVK GKKTIVYCIY
AVLFLVSLNG IRQMKVSGSL IGEMPKSASF FKDILFYEKE FNGVMPLEIM IDTKKKKGVM
KPATIRKMDE LQNTISEIPE LAKPVSVVNL VKYAKQAFYN GNPEYYQLPT SQEQTFILGY
AKNATKNSKE NLMKAYVDST GQYARITTFM KDIGTDEMAK VEGKLRKKID EIFPKDRYEV
TITGKALVFQ KGTTYLAHNL IESLLFAILT IAILMLYLFR SFKMVAASLI TNILPLCITS
GLMGYFGIPL KPSTILVFSI AFGISVDNAI QFMAKYKDEL TQNKGKVKKS VFSALRETGV
STFYTSIVLI LGFATFTLSS FSGTIALGGL ISCTLVFAMF ANLVVLPSLV LTFEKKKTKK
EELENLEK
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