Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0467 |
Symbol | |
ID | 5089981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 482563 |
End bp | 484125 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739862 |
Product | beta-lactamase |
Protein accession | YP_001192822 |
Protein GI | 146298231 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TAAATAGTTT TTTAGTTTCA GTGATCTGCA TTTGTTTTTC ATCTGCAACG GCATTTGCTC AATTAACATC GCAGCAAATT GATGTTTTGA TGGAATCTGC CCTGACAAAG TTTAAAGTGG CAGGCGCATC AATTGCTGTT GTTAAAGATG GAAAAATAAT TCACTTAAAA GGATATGGAG TTGGTTCTGT AGAAACAAAA AAAGCAGTAA ATGAAAATAC TAATTTTCAA ATTGCCTCAA ACAGTAAAGC ATTTACCACG GCAGCGCTTT CTATTTTAGA AGATGAAGGA AAAATAAAAT GGACCGATAA AGTAAGAGAT TATCTTCCGG AGTTTAAAAT GTATAACGAT TATGTAACCG AAAATTTCAA CATACAGGAT TTATTGACTC ATCGCAGCGG ACTAGGTTTA GGAGTGGGTG ATTTGATGTT TTTTCCCGAT GGTTCTAATT TTACCATTAA AGATGTCTTG ACGAGTTTTC AGTATTTTAA ACCCGTTTCG GCTTTTAGAA CCAAATTTGA TTATGATAAT TTGCTTTATA TCGTAGCAGG AGAAGTAATT GCAAGGGTAA GCGGTATGAG TTACGAAGAA TTTGTGCAAA AAAGAATCAT TACTCCTTTG CAAATGAATA ATACGTTTGT GGGAAGCCGT TTGATAAAAG ACAAATCTAA TTTTGCGGTT TCACATTCAT CTGAATCTGG AACGATAAAA ACAATTGACG GTTTTGGAGA TCAAATGAAT GCGGCTGCGG GCGGTATATT TTCTAATGCT TCAGATATGG CAAAATGGAT GATTGTTCGT TTGAATAAAG GCCAATATGG AGAAGACCCA AAAACAACAC TTTTTTCTTT AAAAAACCAT AAAGAAATGT GGAGAATCCA CACGGTTCAG GAATCAGATG AAAACTCAAG ATATAATTTT CATTTTAACG GCTATGGTTT GGGCTGGCAA GTATCAGATG AAAAAGGAAA TTTAAAAGTA TCGCATACCG GAGGTCTGCC GGGAATGCTT TCTATTGTAA CCATGTATCC GGATCTCAAT TTAGGGATTG TAGTTTTAAC CAATACCGAA AATGGCGGAG CAGGACTTTT TTCAGCAGTT TCAAATACGA TTTCAGACAG TTATTTAGGT TTAGACGATT TTGGCTGGAC TGATAAATTA GTAGAATGGA TGAAAGAGGA TAGAAATACG GGTGACGATG TAACCAAAAA AGTCTGGGAA AAAGTTAAGC TGTCAAAAAA TGTAAAAATA AAAAACGAAG ACTTTATAGG TGTTTATGCA GACAAATGGT TTGGCGAAAT TGAAGTATTT GAAAAGAACA AACAATTATG GTTTAAATCC TATCGTTCGC CTAAATTAAA CGGTCCGATG GCTTTTTATA ATGCGAATAC ATTTGCTGTA AAATGGGAAT ATCAAGCTAT GAATTGCGAT GCATTAGCCA TGTTTTCTCT GGATGAAAAC GGCAAAGCTC AATCTATTAA AATGAAAGGC ATTTCTCCAA ACATTGATTT TAGTTTTGAC TTTCAGGATT TGGATTTAAT AAGAGTTAAA TAA
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Protein sequence | MKKVNSFLVS VICICFSSAT AFAQLTSQQI DVLMESALTK FKVAGASIAV VKDGKIIHLK GYGVGSVETK KAVNENTNFQ IASNSKAFTT AALSILEDEG KIKWTDKVRD YLPEFKMYND YVTENFNIQD LLTHRSGLGL GVGDLMFFPD GSNFTIKDVL TSFQYFKPVS AFRTKFDYDN LLYIVAGEVI ARVSGMSYEE FVQKRIITPL QMNNTFVGSR LIKDKSNFAV SHSSESGTIK TIDGFGDQMN AAAGGIFSNA SDMAKWMIVR LNKGQYGEDP KTTLFSLKNH KEMWRIHTVQ ESDENSRYNF HFNGYGLGWQ VSDEKGNLKV SHTGGLPGML SIVTMYPDLN LGIVVLTNTE NGGAGLFSAV SNTISDSYLG LDDFGWTDKL VEWMKEDRNT GDDVTKKVWE KVKLSKNVKI KNEDFIGVYA DKWFGEIEVF EKNKQLWFKS YRSPKLNGPM AFYNANTFAV KWEYQAMNCD ALAMFSLDEN GKAQSIKMKG ISPNIDFSFD FQDLDLIRVK
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