Gene Fjoh_0382 details

Gene Information

• Locus tag: Fjoh_0382
• Symbol: rplF
• ID: 5093265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 400155
• End bp: 400697
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644739776
• Product: 50S ribosomal protein L6
• Protein accession: YP_001192737
• Protein GI: 146298146
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.95579
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TAGGTAAAAG CCCAATTGTA ATCCCTGCTG GTGTAACTGT AGAAGTTAAA 
GACGGTATTA TTACAGTAAA AGGAAAAAAA GGTCAACTAG TTCAGGAGTT TTCGGACGTA 
AATGTAACTG TTGAAGGCGA TCAAGTTTTA GTAGAAAGAT CGTCTGATCA TAAAGACCAT 
AGAGCAAAAC ACGGATTATT CAGATCTTTG ATCAGTAATA TGGTTGTTGG TGTATCTGAA 
GGTTTCACAA AAGAACTAGA ATTAGTTGGA GTTGGTTATA GAGCTTCAAA CCAAGGACAA 
AAATTAGATT TAGCTCTTGG ATATTCTCAC AATATTGTTT TAGAAATTGC TCCAGAAGTA 
AGTTTAGAAA CAATATCTGA AAAAGGTAAG AACCCAATTG TAAAATTAAC ATCATTTGAT 
AAACAACTTT TAGGGCAAGT TGCAGCGAAA ATCAGAGGTT TCCGTAAGCC AGAGCCGTAC 
AAAGGAAAAG GTGTTAAATT TGTGGGTGAA GTATTAAGAA GAAAAGCAGG TAAATCAGCT 
TAA 

 

Protein sequence

MSRIGKSPIV IPAGVTVEVK DGIITVKGKK GQLVQEFSDV NVTVEGDQVL VERSSDHKDH 
RAKHGLFRSL ISNMVVGVSE GFTKELELVG VGYRASNQGQ KLDLALGYSH NIVLEIAPEV 
SLETISEKGK NPIVKLTSFD KQLLGQVAAK IRGFRKPEPY KGKGVKFVGE VLRRKAGKSA