Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0241 |
Symbol | |
ID | 5091296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 252411 |
End bp | 255200 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644739634 |
Product | hypothetical protein |
Protein accession | YP_001192597 |
Protein GI | 146298006 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0416678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAA CTTTTAAATT CCACGCATTA TTCTTTCATT TAATTCTTTT AAATAAATTT TTCTCAATAC GAAGCAGAAT AAAAATGCTG CATTTTTTTG TGTTTTTCTT GTATAGCATT TCCTCTTTTG CACAAAAAAG CACCGTTATC AGTGGTAAAG TTGTTACCGA AAAAGATTCG CCCATTGAAT CTGCAACCAT TTATTTAATG CATCCTAAAG ATTTCTCGAT AGTTGTTTAT ACGCTTTCGG ATAAAAATGG TCACTTTAGA TTAGAAACTA AATCAGGATC TCAAAACAAT ATTTTAAAAA TTTCGGCAGA AGGTTATCTG GAGTTTTCGG ATACAATAGA AAAACGCACT CAGAATATAG ATTTGGGAGT TGTCAGACTT ATGAAATATG ATGTTGAACT GGATGAAGTT ATTATTAAAA ACGATGCTCC TATCCGAATA AAAAAAGATA CCATAGAATT TAATGCTTCT TCTTTTAAGT TACGTCCAGA CGCCAATGTA GAAGCTTTGT TGAAAGAATT GCCCGGTGTA ACTATTGATA TGGACAAAAA AATAATGGTC AATGGAAAAA AGGTTAACCA AGTATTAGTT AACGGAAAAC CTTTTTTTGA TGCAGATGGA AAAATAGCAC TTCAAAACCT TCCTGCTGAG CTCATAAAAA AAGTACAGGT TTCAGACACT AAAACCAAGG AACAGGAATT TACGAAACAA GCTTCGACAT CAGAGAATGT TTCAATCAAT TTGACAATAG ACAAAAAGAA GAATAAAGGC TTTTTTGGCA AATTATTAGG CGGTTATGGA AGTTCAGAAA GATATGAAAG CAGTGCTTTA TTAAGTTATT TTAAAGATAA AAGGCGTGTC AGTTTTTTGG CTTCTTCAAA TAATATTAAT GCATCTGGTT TTTCTATGAA CGAGGTTTTT GATAATATGG GAGGAGGAAG AAACGATGGT TCAGACGGTT CTTTTGGGAG CAGAGGAGGA ATAACAAAGT CGAATATGAT TGGGATAAGT TATACTGACG AGTGGTTTAA GGGAGAAAGC ACAGATTTGA ACTATTATTT TAACAATTCT AATACAGACA ATACAAATAA AACATCAGAA CTTACTTTAC TTCCAACAGG TTCTTTATTG TCGAAATCTG CTTCAAAAAG CGATCAGGAT TTTAATAGAC ATAATGTAAG TTTAAATTTT GAGTATAAAG TTTCCCCTTC AATAAAAGTT TTTTTTGCAC CAGCTATTCA AACAGGAAAA ACGGTATCAG TAAATGCCTT TGATAGAAAA ACCTGGGATG AGAATAATCA GTTAATTAAT TCCAGTAATT CTTTTAATAC AACTCAAAGT AATAATACGA ATTTTAGAAA TAATCTTAGA TTTTTTTTAA ATGCTAAAAA AGAAGGACGA TACTTTACTG CCTCTTTTGA AAACGAGAAT TCACGAAACG ATTTAGATTC AAAGGTAAAT TCATTGACCG TTTTTGCAGA AGGAACAAGT CCCGACGATT TGCGTAATCA AAATGTTACT CAGAAAAACA ATAGAGATAA ATATATAGGA AATCTTCAAT ATTTTGAACC AGTAACAGAT TCGTTAAGAC TGAATTTTTC AGTAATTACA GATTATGAAA AAACAAGCGA TGATAAAAAA ACATTCGACC GCAATGGTCA GGATATGGAA TACGATGTTT TTAATGAATC ACTTAGTAAT TTTAACTCTT TTAATAGTTT TGGAGTGAAC CCAAAAGTGG GTTTTAGTAT GAGTATAAAA AAGCTTGATT TATCGGCATC TGCAGGGACT TCTGTTATCA GGACAGAAAA TCATGCATTT TATTTAAATG AAACAATAGA TTTGAATAAA AACTATTTTA TCCCAAACGG AACCATTAGT GCCAATTACA GCATTTCACA ATCTCAGAGT GTATTAATGA TGTATGAGCG TAAATATACA ATTCCAAGTG GTAATCAGGT TTTGGCGGTT GCTGATTTAG ATAATCCTTT AGTGGTTAGA ACAGGAAATC CTAATTTAAA AGCTTCGACT TTTCATTTTT TACAGACAGG TTTTTCAAGT TATAATTTTG AATCAGATTC GGGTTATTTC CTTCATTTTA GTACGACCTA TTTTGATAAT CAGATTGTGG GAGCTTCTGC TTATAACAGT TCAGGGAAAC AGATTTCAAC TTTTGATAAT GTTGAAGGCA CATACGATAT GTTACTGGCA GGAGAATGGA ACAAAAGGAT AAAGAAAGAT GTGAATACTT TTGGACTGCG GTTTTCTCTG TATGCTAATT ATAATTTAAA TAAAGGTTTT ACAAATAACC AGCTGTATGA GGCAAAAGCA TTTAGACTCA ATCCCGGCTT TGGATTTACA TATGAATATG GTGAATTGTT AAATATCCAG CCGTATTATA ACTTTACATA TAATGACATT CGATATAATA ATACTTCTTT AAGTTCAACT TCAAATACAA CTCATAATTT TAATGTCGAA ATAACAAACT TCTGGCCTAA GAACTGGGTT TTTGGAAACG ACTTTGGTTA CAACTATAAT TCAAATATTT CTGGACCATA TAAAAGAGAT TTCTATTTAT GGAACACTAG TTTGTCCTAC AAATTCGCGA AACAATTTAC ATTCAAAGTA AAAGTTTATG ATTTACTCAA TCAAAATCAG AGCACTTCGA GAACCATTAC TTCAACAGCT GTTGTTGATT CAGAAAGTAA TGTTTTAAAG CGTTATGTCA TGTTTTCTTT ATTGTATAAA TTTAAAAATT TTGTAACCAA TGAGAGTTAG
|
Protein sequence | MIKTFKFHAL FFHLILLNKF FSIRSRIKML HFFVFFLYSI SSFAQKSTVI SGKVVTEKDS PIESATIYLM HPKDFSIVVY TLSDKNGHFR LETKSGSQNN ILKISAEGYL EFSDTIEKRT QNIDLGVVRL MKYDVELDEV IIKNDAPIRI KKDTIEFNAS SFKLRPDANV EALLKELPGV TIDMDKKIMV NGKKVNQVLV NGKPFFDADG KIALQNLPAE LIKKVQVSDT KTKEQEFTKQ ASTSENVSIN LTIDKKKNKG FFGKLLGGYG SSERYESSAL LSYFKDKRRV SFLASSNNIN ASGFSMNEVF DNMGGGRNDG SDGSFGSRGG ITKSNMIGIS YTDEWFKGES TDLNYYFNNS NTDNTNKTSE LTLLPTGSLL SKSASKSDQD FNRHNVSLNF EYKVSPSIKV FFAPAIQTGK TVSVNAFDRK TWDENNQLIN SSNSFNTTQS NNTNFRNNLR FFLNAKKEGR YFTASFENEN SRNDLDSKVN SLTVFAEGTS PDDLRNQNVT QKNNRDKYIG NLQYFEPVTD SLRLNFSVIT DYEKTSDDKK TFDRNGQDME YDVFNESLSN FNSFNSFGVN PKVGFSMSIK KLDLSASAGT SVIRTENHAF YLNETIDLNK NYFIPNGTIS ANYSISQSQS VLMMYERKYT IPSGNQVLAV ADLDNPLVVR TGNPNLKAST FHFLQTGFSS YNFESDSGYF LHFSTTYFDN QIVGASAYNS SGKQISTFDN VEGTYDMLLA GEWNKRIKKD VNTFGLRFSL YANYNLNKGF TNNQLYEAKA FRLNPGFGFT YEYGELLNIQ PYYNFTYNDI RYNNTSLSST SNTTHNFNVE ITNFWPKNWV FGNDFGYNYN SNISGPYKRD FYLWNTSLSY KFAKQFTFKV KVYDLLNQNQ STSRTITSTA VVDSESNVLK RYVMFSLLYK FKNFVTNES
|
| |