Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0141 |
Symbol | |
ID | 5094470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 148120 |
End bp | 148956 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644739533 |
Product | aminotransferase, class IV |
Protein accession | YP_001192498 |
Protein GI | 146297907 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAATT TTAACGGAAA CATTGTAGAG GAAGAAAATT TATTAACTCA AAATCGCGCA TTTTTATTTG GAGACGGCGT TTTTGAAACA GTTAAAATAA TCAATAATAA AATTCTATTT CTTGAAGACC ATTATTTCAG GCTTATGGCT TCAATGCGTG TTGTGAGAAT GGAAATTCCA ATGAATTTTA CAATGGAACA TTTTGAAGAA CAGATTTTAA ATCTTGTACA GCAAAAAGGA ATTTCAGCAT CTGCAAGAGC CCGTATCACG GTTTTTAGAA ATGATGGAGG TTTGTATCTT CCAAAAACCA ATGAAATTTC ATATTTAATT CATGCATCGC AGCTGGAAAG TACAGTATAT GCTTTAAATA CAGGTCAGTA CGAAGTGGAT TTGTATAAAG ACTTCTATGT AACAAAACAG CTTTTATCGT CGATTAAAAC GACTAATAAG ATGATAAATG TAACCGGAAG TATTTTTGCT TACGAAAACG GACTTGCTAA TTGTCTTTTA ATTAATGATG CAAAAAATGT GGTCGAAGGT CTTCAGGGTA ATTTATTCAT GCTGGCTGGA AAAAAGCTAA TTACGCCGCC AATTTCTGAA GGCTGTTTAA ACGGAATTAT GCGCAAGCAG ATTTTAGCCT TAGCTAAGAA AGTAGAAGGC ATAGAAGTAG TTGAAGAAAT AATTTCGCCG TTCGATCTTC AAAAAGCCGA CGAATTATTT CTGACCAATG TAATCATGGG AATACAACCG ATAACTAAAT ATCGAAAAAA AGAGTTTACA AGCAATCTGG CTCATTTATT AGTGCAGAAG CTAAATGAAT CCATAACTGA AAATTAA
|
Protein sequence | MINFNGNIVE EENLLTQNRA FLFGDGVFET VKIINNKILF LEDHYFRLMA SMRVVRMEIP MNFTMEHFEE QILNLVQQKG ISASARARIT VFRNDGGLYL PKTNEISYLI HASQLESTVY ALNTGQYEVD LYKDFYVTKQ LLSSIKTTNK MINVTGSIFA YENGLANCLL INDAKNVVEG LQGNLFMLAG KKLITPPISE GCLNGIMRKQ ILALAKKVEG IEVVEEIISP FDLQKADELF LTNVIMGIQP ITKYRKKEFT SNLAHLLVQK LNESITEN
|
| |