Gene Fjoh_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0138 
Symbolfmt 
ID5094467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp146033 
End bp146980 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content35% 
IMG OID644739530 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001192495 
Protein GI146297904 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.483644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT TACGAATTAT TTTTATGGGA ACTCCAGAAT TTGCTGTCGG CATTTTGGAT 
ACCATCATTA AAAACAATTA CGATGTTGTG GGCGTTATTA CAGCAGCAGA TAAACCAGCC
GGGCGCGGAC AAAAAATAAA ATATTCAGCT GTTAAAGAAT ATGCTTTAGC AAATAATCTT
ACTTTACTGC AGCCAACAAA TTTAAAAGAT GAAAGTTTTT TAGCAGAATT AAAAGCACTG
AATGCGAATT TACAAATTGT TGTTGCTTTT AGAATGCTGC CAAAAGTAGT TTGGGAAATG
CCAAATTTAG GGACTTTTAA TCTTCATGCT TCTTTGCTGC CAAATTACCG CGGTGCCGCA
CCAATTAACT GGGCTATTAT TAATGGCGAA ACCAAAACCG GCGTTACGAC ATTTTTTATT
GATGATAAAA TTGACACCGG AGCAATGATT CTTAATTCAG AAATTGCAAT TGAACCAGCA
GAAAACGCAG GTCAATTACA CGATCGATTA ATGAACTTAG GAAGCACAAC TGTAATCGAT
ACTTTAAAAG TAATTGAAAA CGGAAATGTT ATAACAACAA TTCAGGAAGA TAACAACGAT
ATTAAAACGG CTTATAAACT AAATAAAGAA AACTGCAAAA TCGACTGGAC AAAATCTGGA
GACGAAATCA ACAATCTTAT TCGCGGCTTA AGTCCTTATC CTGCAGCGTG GTGCTTTTTG
AAAGATAAAA ATGAAGAATT GAGCATCAAA ATATATGAAG CCAAACTGCT CGAAGAAGCC
CATTCTTATG AAGCCGGGAA ATTAATAAGC GGTAAAAAAG AAATTAAAAT TGCAATAAAA
AACGGCTTCA TACAGTTATT AAGTTTACAA TTACCAGGAA AAAAGAGAAT GCAGGTGGCA
GAATTGTTAA ATGGGATAAC TTTTTCTGAT GAGGCAAAGG TCTATTAA
 
Protein sequence
MEKLRIIFMG TPEFAVGILD TIIKNNYDVV GVITAADKPA GRGQKIKYSA VKEYALANNL 
TLLQPTNLKD ESFLAELKAL NANLQIVVAF RMLPKVVWEM PNLGTFNLHA SLLPNYRGAA
PINWAIINGE TKTGVTTFFI DDKIDTGAMI LNSEIAIEPA ENAGQLHDRL MNLGSTTVID
TLKVIENGNV ITTIQEDNND IKTAYKLNKE NCKIDWTKSG DEINNLIRGL SPYPAAWCFL
KDKNEELSIK IYEAKLLEEA HSYEAGKLIS GKKEIKIAIK NGFIQLLSLQ LPGKKRMQVA
ELLNGITFSD EAKVY