Gene Ent638_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_2686 
Symbol 
ID5114653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp2896040 
End bp2899117 
Gene Length3078 bp 
Protein Length1025 aa 
Translation table11 
GC content57% 
IMG OID640492874 
Productmultidrug efflux system subunit MdtC 
Protein accessionYP_001177403 
Protein GI146312329 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.508411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTTT TCGCCCTCTT CATTTACCGC CCGGTCGCGA CGATTTTGAT TGCGGTCGCC 
ATCACGCTGT GCGGCGTGCT CGGCTTCCGC CTTCTGCCGG TAGCGCCGCT GCCGCAGGTG
GATTTCCCGG TCATCATGAT CAGCGCTTCG CTGCCAGGCG CCTCGCCAGA AACCATGGCG
TCCTCGGTTG CCACACCGCT GGAGCGCTCG CTTGGACGCA TTGCCGGGGT CAACGAAATG
ACCTCCAGCA GTTCGCTGGG CAGCACACGT ATTATTCTGG AATTCAATTT TAATCGCGAT
ATCAACGGCG CGGCGCGCGA CGTGCAGGCA GCAATCAATG CCGCGCAAAG CCTGTTGCCG
AGCGGAATGC CGAGCCGTCC AACCTATCGC AAAGCGAACC CGTCCGATGC GCCGATCATG
ATTTTGACGC TCACCTCGGA CACCTATTCG CAGGGTGAAT TGTACGATTT CGCCTCCACC
CAGTTGGCGC AGACGATCGC CCAGATTGAC GGCGTGGGCG ACGTAGACGT TGGCGGCAGT
TCCCTGCCCG CCGTGCGGGT GGGGTTAAAT CCGGAAGCGC TGTTTAATCA GGGCGTGTCG
CTGGACGATG TGCGCAGCGC CATCAGCAAT GCCAACGTGC GCAAACCGCA GGGGGCAATT
GAGGACAGCA GCCATCGCTG GCAAATCCAG ACCAACGACG AACTCAAAAC CGCCGCCGAA
TATCAGCCGC TGATTATTCA CTACAACAAT GGTGCAGCGG TGCGTTTGAG CGATGTGGCC
AGCGTCACCG ATTCCGTCCA GGACGTGCGT AACGCCGGGA TGACCAATGC CAAACCGGCC
ATTTTGCTGA TGATCCGTAA GCTGCCGGAA GCCAATATTA TCCAGACGGT GAATAGCATT
CGTGCCCGAC TGCCGGAACT CCAGGAGACG ATTCCAGCGG CCATTGATTT GCAAATCGCG
CAGGATCGTT CGCCGACGAT TCGCGCCTCG CTGGAAGAAG TCGAACAGAC GCTGGTGATT
TCGATTGCAC TGGTGATCCT GGTGGTGTTC CTGTTCCTGC GTTCGGGACG TGCCACGCTC
ATCCCTGCCG TGGCGGTTCC CGTCTCGCTG ATCGGCACGT TCGCCGCCAT GTATTTGTGC
GGTTTCAGCC TCAATAATCT GTCGCTGATG GCGCTGACCA TCGCCACCGG ATTTGTCGTC
GATGACGCCA TCGTGGTGCT GGAAAACATT TCTCGCCATC TGGAAGCGGG TATGAAACCG
CTGCAAGCGT CATTGCAGGG CACGCGAGAA GTCGGCTTTA CGGTGCTCTC CATGAGCGTA
TCGCTGGTGG CAGTTTTCCT GCCGCTGCTG CTGATGGGCG GATTACCGGG GCGATTATTA
CGCGAATTTG CCGTTACGCT CTCGGTGGCG ATTGGCATTT CACTGGTGAT TTCGCTGACC
CTCACACCGA TGATGTGCGG CTGGATGCTC AAACGCAGCA AGCCGCATTC ACAGCCGCGC
AATAAAGGCT TTGGCCGCGT GCTGGTGGCG ATGCAGGAAG GCTACGGCAA ATCGCTGAAA
TGGGTGCTGA ACCATACGCG GATTGTTGGG CTGGTGCTGG TGGGAACCAT TGCGCTGAAC
GTCTGGATGT ATATCACCAT CCCCAAAACG TTCTTCCCGG AGCAGGACAC AGGCGTGCTG
ATGGGTGGGA TTCAGGCGGA TCAGAGCATT TCCTTCCAGG CGATGCGCGT GAAGCTGCAG
GATTTCATGA AGATTATTCG CGAAGATCCT GCCGTGGATA ACGTCACCGG TTTTACCGGC
GGCTCGCGAG TGAACAGCGG AATGATGTTT ATTACCCTGA AGGCGCGCGG GGAGCGCAAC
GAAACCGCCC AGCAGGTGAT TGACCGTCTG CGTGGCAAAC TGGCTAAAGA ACCGGGCGCA
AACCTGTTTT TGATGGCCGT TCAGGATATC CGCGTCGGCG GACGTCAGTC GAATGCGAGC
TATCAGTACA CGCTGCTGTC CGACGACCTG GCGGCGCTGC GTGAATGGGA GCCCAAAATC
CGTAAAGCGC TGGCGGCAAT GCCGGAGCTG GCAGACGTGA ACTCCGACCA ACAGGACAAC
GGCGCGGAGA TGAACCTGAC CTACGACCGC GAAACCATGT CGCGGTTAGG GATTGACGTT
GCAGCCGCCA ATAGCCTGCT GAATAACGCG TTTGGTCAGC GGCAGATATC CACTATTTAT
CAGCCGATGA ACCAGTACAA AGTGGTGATG GAAGTCGATC CGCGCTACAC CCAGGATATC
AGCGCGCTGG ATAAAATGTA CGTCATTAAC AACGACGGCA AATCGATCCC GTTGTCTTAT
TTTGCCAGTT GGCAACCGGC TAATGCGCCG TTGTCGGTGA ACCATCAGGG GCTGTCTGCC
GCCTCGACGA TTTCGTTTAA CCTGCCGACC GGCTCGTCGT TATCCGAAGC CAGCGACGCG
ATTAACCGCA CCATGACGCA GCTTGGCGTG CCGTCTACCG TGCGCGGCAG TTTTGCCGGT
ACCGCACAGG TGTTCCAGGA CACCATGAAT TCGCAGGTGA TTTTGATTCT GGCGGCAATT
GCGACGGTCT ATATCGTGCT GGGCATTTTG TATGAAAGCT ACGTTCATCC GCTGACGATC
CTTTCTACTC TGCCATCGGC GGGCGTCGGT GCGTTGCTGG CGCTGGAGTT GTTCGATGCG
CCCTTTAGCC TCATCGCCCT TATCGGGATC ATGCTATTAA TAGGTATCGT GAAGAAAAAC
GCGATCATGA TGGTGGACTT CGCCCTCGAC GCGCAGCGCA ACGGCAATAT GTCGCCTCAG
GATGCCATTT TCCAGGCCTG CATTCTGCGT TTTCGCCCGA TCATGATGAC CACGCTGGCA
GCCTTATTTG GCGCGCTGCC TCTGGTCATT TCCAGCGGTG ACGGCTCTGA ACTGCGCCAG
CCGCTGGGCA TTACCATTGT CGGCGGGCTG GCGATGAGCC AGCTGTTAAC GCTGTACACC
ACGCCAGTGG TCTATCTGTT CTTTGACCGT TTGCGGGTGC GTTTTTCGCG TAAAAACAGA
ACGACGGTAA CCGAGTAA
 
Protein sequence
MKFFALFIYR PVATILIAVA ITLCGVLGFR LLPVAPLPQV DFPVIMISAS LPGASPETMA 
SSVATPLERS LGRIAGVNEM TSSSSLGSTR IILEFNFNRD INGAARDVQA AINAAQSLLP
SGMPSRPTYR KANPSDAPIM ILTLTSDTYS QGELYDFAST QLAQTIAQID GVGDVDVGGS
SLPAVRVGLN PEALFNQGVS LDDVRSAISN ANVRKPQGAI EDSSHRWQIQ TNDELKTAAE
YQPLIIHYNN GAAVRLSDVA SVTDSVQDVR NAGMTNAKPA ILLMIRKLPE ANIIQTVNSI
RARLPELQET IPAAIDLQIA QDRSPTIRAS LEEVEQTLVI SIALVILVVF LFLRSGRATL
IPAVAVPVSL IGTFAAMYLC GFSLNNLSLM ALTIATGFVV DDAIVVLENI SRHLEAGMKP
LQASLQGTRE VGFTVLSMSV SLVAVFLPLL LMGGLPGRLL REFAVTLSVA IGISLVISLT
LTPMMCGWML KRSKPHSQPR NKGFGRVLVA MQEGYGKSLK WVLNHTRIVG LVLVGTIALN
VWMYITIPKT FFPEQDTGVL MGGIQADQSI SFQAMRVKLQ DFMKIIREDP AVDNVTGFTG
GSRVNSGMMF ITLKARGERN ETAQQVIDRL RGKLAKEPGA NLFLMAVQDI RVGGRQSNAS
YQYTLLSDDL AALREWEPKI RKALAAMPEL ADVNSDQQDN GAEMNLTYDR ETMSRLGIDV
AAANSLLNNA FGQRQISTIY QPMNQYKVVM EVDPRYTQDI SALDKMYVIN NDGKSIPLSY
FASWQPANAP LSVNHQGLSA ASTISFNLPT GSSLSEASDA INRTMTQLGV PSTVRGSFAG
TAQVFQDTMN SQVILILAAI ATVYIVLGIL YESYVHPLTI LSTLPSAGVG ALLALELFDA
PFSLIALIGI MLLIGIVKKN AIMMVDFALD AQRNGNMSPQ DAIFQACILR FRPIMMTTLA
ALFGALPLVI SSGDGSELRQ PLGITIVGGL AMSQLLTLYT TPVVYLFFDR LRVRFSRKNR
TTVTE