Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ent638_1836 |
Symbol | nikC |
ID | 5113359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Enterobacter sp. 638 |
Kingdom | Bacteria |
Replicon accession | NC_009436 |
Strand | + |
Start bp | 1995969 |
End bp | 1996802 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640492027 |
Product | nickel transporter permease NikC |
Protein accession | YP_001176566 |
Protein GI | 146311492 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00660391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTTTCT TGCGCACGGC GCGCTGGCCG GTTCGTCTGG CGATGATCAT CATCGTGTTG CTCGCGGCTA TCGCACTCAC CAGCCAGTGG TGGTTGCCGT ACGATCCGCT CGCCATTAAT TTACCCGCGC GTTTGCTATC GCCCGACAGC CAGCACTGGC TGGGGACCGA TCATCTCGGG CGCGACATTT TCTCCCGTCT GCTCGCGGCA ACACGCGTAT CGCTGGGATC GGTGATCGCC TGTCTGTTGC TGGTGCTGGT GTTGGGCCTA ACGATAGGGG GCGCGGCAGG GCTATTGGGC GGGCGAGTCG ATCAGTTGAC CATGCGTGTG GCCGATATGT TTATGACCTT TCCGACCTCC ATTCTGTCGT TCTTCCTGGT GGGCGTTCTG GGAACGGGGC TGACCAACGT CATTATCGCT ATCGCGCTGT CGCACTGGGC CTGGTATGCG CGCATGGTCC GCAGTCTGGT TATTTCGCTG CGGCAGCGGG AATTTGTGCT GGCGTCGCGA CTCTCTGGGG CGGGGCACGT GCGGGTCTTT CTCGATCATC TGACGGGTGC TGCGCTGCCA TCGCTGCTGG TGCTGGCGAC GCTGGATATC GGACACATGA TGCTGCACGT CGCCGGGATG TCGTTTTTAG GGCTGGGCGT GACGGCGCCT ACCGCGGAAT GGGGCGTCAT GATTAACGAC GCGCGCCAGT ATATCTGGAC TCAGCCGCTG CAAATGTTCT GGCCCGGTCT GGCGCTGTTC ATCAGCGTGA TGGCCTTTAA TCTGGTGGGT GACGCGCTGC GCGATCACCT TGATCCACAT CTTGAGACGG AGCATGCCCA CTGA
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Protein sequence | MSFLRTARWP VRLAMIIIVL LAAIALTSQW WLPYDPLAIN LPARLLSPDS QHWLGTDHLG RDIFSRLLAA TRVSLGSVIA CLLLVLVLGL TIGGAAGLLG GRVDQLTMRV ADMFMTFPTS ILSFFLVGVL GTGLTNVIIA IALSHWAWYA RMVRSLVISL RQREFVLASR LSGAGHVRVF LDHLTGAALP SLLVLATLDI GHMMLHVAGM SFLGLGVTAP TAEWGVMIND ARQYIWTQPL QMFWPGLALF ISVMAFNLVG DALRDHLDPH LETEHAH
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