Gene Emin_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0612 
Symbol 
ID6262809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp669331 
End bp669816 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID642611083 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875504 
Protein GI187251022 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0186796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAG GATTTACTTT AATTGAACTT TTGGTTGTCG TTTTGATAAT AGGCATTTTG 
GCCGCGATAG CTTTACCCCA ATATCAAAAC GCCGTATATA AAACACGTAT GCAAAATTAT
ATAGCAATGT CCGAAGGTAT ACGTAAAGCG CAGGAAATTT ATTATTTGCA TACGGGTGAT
TATGTAGCGG ATTTAAATTA CTTAGATATT GATTATATAG CTGCTTGCCC CGCGCGCAGC
GCGGGCGATC AAACTATTAT AGACTGTAAA GACGCGGAAA TTGACAACTT TTCGGGAGTT
CAGGCTACCG GGGAAAGGAA TGTAAGGGTT TTCTTCTGCC CAGGTTATAC AGGCACTGAG
TGCCGCTCAA ATCTTGTAGC GACTTATATT TCTTATTTTG AAAACGCGCC CAATAACGCA
GGGCAGAGAA GTTGTGTGGG GAACACTGAT AAAGGAATTA GACTTTGTAA ATCTTTAGGA
TATTGA
 
Protein sequence
MQKGFTLIEL LVVVLIIGIL AAIALPQYQN AVYKTRMQNY IAMSEGIRKA QEIYYLHTGD 
YVADLNYLDI DYIAACPARS AGDQTIIDCK DAEIDNFSGV QATGERNVRV FFCPGYTGTE
CRSNLVATYI SYFENAPNNA GQRSCVGNTD KGIRLCKSLG Y