Gene Emin_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0243 
Symbol 
ID6263045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp261119 
End bp264706 
Gene Length3588 bp 
Protein Length1195 aa 
Translation table11 
GC content36% 
IMG OID642610707 
ProductCRISPR-associated endonuclease Csn1 family protein 
Protein accessionYP_001875142 
Protein GI187250660 
COG category[S] Function unknown 
COG ID[COG3513] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01865] CRISPR-associated protein, Csn1 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA ATATAAATAC CAAACAAAAT CATATATATA TTAAACAAGC TCAAAAAATA 
AAGGAAAAAC TAGGGGATAA ACCTTATCGC ATAGGCTTGG ATTTGGGCGT GGGGTCTATA
GGTTTTGCAA TAGTTTCCAT GGAAGAAAAC GATGGTAATG TCTTATTGCC GAAAGAAATA
ATAATGGTAG GAAGCAGGAT TTTCAAAGCG TCCGCCGGGG CGGCAGATAG GAAATTATCA
CGAGGGCAAA GGAATAATCA CAGGCACACC CGAGAAAGAA TGCGGTATTT GTGGAAAGTT
CTGGCGGAAC AAAAATTAGC TTTGCCAGTT CCTGCCGATT TGGATAGGAA AGAAAACTCT
TCAGAAGGGG AAACGTCAGC CAAACGATTT TTGGGAGACG TTTTGCAGAA AGATATATAT
GAGTTGAGAG TAAAATCTCT TGATGAAAGG CTTTCTTTAC AGGAACTGGG CTATGTTTTA
TATCATATTG CAGGGCACAG AGGCTCGTCT GCCATAAGAA CTTTTGAGAA TGATTCAGAG
GAAGCCCAAA AAGAAAATAC CGAAAATAAA AAAATAGCAG GAAACATAAA AAGATTGATG
GCAAAAAAGA ATTATAGAAC ATACGGCGAG TATCTATATA AAGAATTTTT TGAAAACAAA
GAAAAACATA AGCGGGAAAA AATAAGCAAC GCAGCGAATA ATCATAAATT CTCCCCCACA
AGGGATTTGG TGATTAAAGA AGCGGAGGCT ATATTAAAAA AACAAGCCGG GAAGGATGGT
TTTCATAAAG AATTAACAGA AGAATATATT GAAAAGCTTA CAAAAGCAAT TGGTTATGAG
TCGGAAAAAC TAATCCCGGA AAGTGGTTTC TGCCCTTATT TAAAAGACGA AAAACGCTTG
CCTGCATCTC ATAAATTAAA TGAAGAACGC AGACTTTGGG AAACACTAAA CAACGCAAGA
TACTCTGACC CCATAGTTGA TATAGTAACG GGCGAAATTA CAGGATATTA CGAAAAGCAA
TTCACCAAAG AACAAAAGCA AAAACTGTTT GATTATCTGT TAACCGGGAG TGAACTTACG
CCGGCCCAAA CAAAAAAACT GCTTGGGCTA AAAAATACAA ACTTCGAAGA TATCATTTTA
CAAGGCAGAG ATAAAAAAGC ACAAAAAATA AAAGGTTATA AATTAATCAA ATTGGAAAGC
ATGCCCTTCT GGGCAAGATT ATCTGAGGCG CAGCAAGACA GTTTCCTTTA CGATTGGAAC
TCCTGCCCTG ATGAAAAACT GTTGACCGAA AAACTTTCAA ACGAATATCA CTTAACAGAG
GAAGAAATCG ATAATGCGTT TAATGAAATT GTATTGTCTT CTTCCTACGC GCCGCTTGGC
AAGAGTGCCA TGCTCATAAT TTTAGAAAAA ATTAAAAATG ATTTATCTTA TACGGAAGCT
GTGGAAGAAG CCTTAAAAGA AGGAAAATTA ACCAAAGAAA AACAAGCGAT AAAAGACAGG
CTACCATATT ATGGCGCGGT ACTCCAGGAA AGCACGCAAA AAATAATTGC AAAAGGCTTC
TCCCCGCAAT TTAAAGATAA AGGCTATAAA ACCCCACATA CAAATAAATA TGAACTGGAG
TATGGGAGGA TAGCCAATCC CGTCGTTCAC CAAACTTTGA ATGAACTTCG CAAATTGGTT
AATGAAATTA TAGATATTTT AGGGAAGAAA CCCTGCGAAA TAGGTCTGGA AACCGCCAGA
GAACTAAAAA AATCCGCCGA AGACAGGTCG AAACTTAGCC GTGAGCAAAA CGATAATGAA
AGCAACAGAA ATAGAATTTA TGAAATTTAT ATAAGACCTC AGCAGCAGGT GATAATTACA
AGAAGAGAAA ACCCACGAAA TTATATTTTG AAATTTGAAT TATTGGAGGA ACAAAAAAGC
CAATGCCCAT TTTGTGGGGG ACAAATAAGC CCTAATGATA TTATTAATAA CCAAGCCGAT
ATAGAACACT TATTCCCCAT TGCCGAAAGC GAAGACAACG GCAGGAATAA CCTTGTAATT
TCCCACAGCG CTTGCAATGC CGATAAGGCA AAACGTTCCC CGTGGGCCGC GTTTGCTTCG
GCAGCAAAAG ACAGCAAGTA TGACTATAAC AGAATACTTT CTAATGTAAA AGAAAACATT
CCGCATAAAG CATGGCGTTT TAATCAGGGT GCTTTTGAAA AGTTTATAGA AAATAAACCA
ATGGCTGCCA GGTTTAAAAC GGATAACTCT TATATTTCAA AAGTCGCGCA TAAATATCTT
GCCTGTTTGT TTGAAAAGCC CAATATAATC TGCGTAAAAG GCTCTCTAAC AGCGCAGTTA
CGTATGGCGT GGGGACTGCA GGGGTTAATG ATACCTTTTG CCAAACAGCT GATTACCGAG
AAAGAGTCGG AGAGCTTTAA TAAGGATGTA AACAGCAATA AAAAAATAAG ACTGGACAAC
AGACATCACG CGTTAGACGC TATCGTTATC GCGTACGCTT CGAGAGGATA CGGCAATCTG
CTAAATAAAA TGGCCGGTAA GGATTATAAA ATTAATTATA GCGAGCGCAA TTGGCTTTCT
AAAATTTTAT TACCTCCTAA TAATATTGTC TGGGAAAATA TTGATGCTGA TTTAGAAAGT
TTTGAGAGTT CGGTAAAAAC TGCGCTTAAA AACGCCTTTA TCAGTGTTAA ACATGACCAT
AGTGATAACG GCGAGCTTGT AAAAGGAACT ATGTATAAAA TTTTCTACTC GGAAAGGGGA
TATACTTTAA CAACATATAA AAAATTAAGT GCTTTAAAAT TAACAGATCC CCAAAAGAAG
AAAACCCCGA AAGATTTTTT AGAAACGGCT CTTTTAAAAT TTAAAGGCAG AGAGAGTGAG
ATGAAAAATG AGAAAATAAA ATCTGCCATT GAGAATAATA AAAGATTATT TGATGTTATA
CAAGATAACT TGGAAAAAGC GAAAAAGCTT CTGGAAGAAG AAAATGAAAA GTCAAAGGCG
GAAGGAAAAA AAGAAAAGAA TATTAATGAT GCGAGTATAT ATCAAAAAGC TATTTCTTTA
TCCGGCGATA AATATGTGCA GCTTTCCAAG AAAGAGCCCG GTAAATTTTT TGCTATTTCT
AAGCCCACGC CTACAACTAC CGGATACGGT TACGATACGG GCGACAGTTT ATGCGTGGAT
TTATATTATG ATAATAAAGG CAAACTCTGC GGAGAAATTA TAAGGAAAAT TGACGCACAG
CAAAAGAACC CTTTGAAATA TAAAGAACAG GGATTTACTT TGTTTGAAAG GATTTATGGC
GGGGATATTT TAGAGGTTGA TTTTGATATC CACAGTGATA AAAACTCTTT TAGAAACAAT
ACCGGCTCTG CGCCAGAAAA TAGAGTTTTT ATTAAAGTGG GAACATTTAC CGAAATTACA
AATAACAATA TTCAAATATG GTTTGGCAAT ATAATAAAAA GTACCGGCGG GCAGGATGAT
TCATTTACTA TAAACTCAAT GCAGCAATAC AATCCCCGTA AGCTTATTTT AAGTTCTTGC
GGATTTATAA AATATCGTTC GCCGATATTA AAAAATAAAG AAGGTTAA
 
Protein sequence
MQKNINTKQN HIYIKQAQKI KEKLGDKPYR IGLDLGVGSI GFAIVSMEEN DGNVLLPKEI 
IMVGSRIFKA SAGAADRKLS RGQRNNHRHT RERMRYLWKV LAEQKLALPV PADLDRKENS
SEGETSAKRF LGDVLQKDIY ELRVKSLDER LSLQELGYVL YHIAGHRGSS AIRTFENDSE
EAQKENTENK KIAGNIKRLM AKKNYRTYGE YLYKEFFENK EKHKREKISN AANNHKFSPT
RDLVIKEAEA ILKKQAGKDG FHKELTEEYI EKLTKAIGYE SEKLIPESGF CPYLKDEKRL
PASHKLNEER RLWETLNNAR YSDPIVDIVT GEITGYYEKQ FTKEQKQKLF DYLLTGSELT
PAQTKKLLGL KNTNFEDIIL QGRDKKAQKI KGYKLIKLES MPFWARLSEA QQDSFLYDWN
SCPDEKLLTE KLSNEYHLTE EEIDNAFNEI VLSSSYAPLG KSAMLIILEK IKNDLSYTEA
VEEALKEGKL TKEKQAIKDR LPYYGAVLQE STQKIIAKGF SPQFKDKGYK TPHTNKYELE
YGRIANPVVH QTLNELRKLV NEIIDILGKK PCEIGLETAR ELKKSAEDRS KLSREQNDNE
SNRNRIYEIY IRPQQQVIIT RRENPRNYIL KFELLEEQKS QCPFCGGQIS PNDIINNQAD
IEHLFPIAES EDNGRNNLVI SHSACNADKA KRSPWAAFAS AAKDSKYDYN RILSNVKENI
PHKAWRFNQG AFEKFIENKP MAARFKTDNS YISKVAHKYL ACLFEKPNII CVKGSLTAQL
RMAWGLQGLM IPFAKQLITE KESESFNKDV NSNKKIRLDN RHHALDAIVI AYASRGYGNL
LNKMAGKDYK INYSERNWLS KILLPPNNIV WENIDADLES FESSVKTALK NAFISVKHDH
SDNGELVKGT MYKIFYSERG YTLTTYKKLS ALKLTDPQKK KTPKDFLETA LLKFKGRESE
MKNEKIKSAI ENNKRLFDVI QDNLEKAKKL LEEENEKSKA EGKKEKNIND ASIYQKAISL
SGDKYVQLSK KEPGKFFAIS KPTPTTTGYG YDTGDSLCVD LYYDNKGKLC GEIIRKIDAQ
QKNPLKYKEQ GFTLFERIYG GDILEVDFDI HSDKNSFRNN TGSAPENRVF IKVGTFTEIT
NNNIQIWFGN IIKSTGGQDD SFTINSMQQY NPRKLILSSC GFIKYRSPIL KNKEG