Gene Elen_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3028 
Symbol 
ID8417362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3516361 
End bp3517026 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID645026007 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003183360 
Protein GI257792754 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR00402] ferredoxin-type protein NapF 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG AGGACGAGAT TTCGTCGAAG AGGGCGAAGG GGCCGTTGGA CGTGTCGCGG 
CGCGCGCTGC TCATCGGCGC GGGAAGCACG GCGGCGCTGC TGGGATTGGG GGCGCTGCGC
TATGCGGGGC ATAACCCGTT GGTGCGCCCG CCGGGAGGGC AGGACGAGGC GCGCCTCGTG
TCGGCGTGCA TCCGATGCGA GAAGTGCTAC GAGGCGTGCC CGCGCGGCGT CATCGTGCCT
GCGCATATCG AGGACGGGCT GCTGGGCATG CGCTCGCCCG CGCTGAAGTT CGACGCCGAT
TTCTGCGACT ACTGCGCCGA CGAGAACGGC GGGGAGCCGT TGTGCGTGAA GGTGTGCCCC
ACCGAGGCGC TGGCGCTGCC CGCAGACGCT ACGGCGGAGA ACACGCTTTT GGGTTTGGCC
GTGATCGACG AGGCGCAGTG CCTTGCATTC CGCGACACGG GGTGCCGTTA CTGCTACGAC
GCGTGCCCCT ACGAGGCCAT AGAGCTGACG GGCGAGGGCG CCAACCCGCA CGTGTCCGTG
CTGGCTGACA AGTGCAACGG GTGCGGCGCA TGCGAGAGTG TGTGCGTATC GCTGAAGGCG
GGGTCCATCG TGTCGGGCGC GCAGGAGCGC GCCATCGTCG TCAAGCCGAT CGAGTCGGCG
GAATAG
 
Protein sequence
MSEEDEISSK RAKGPLDVSR RALLIGAGST AALLGLGALR YAGHNPLVRP PGGQDEARLV 
SACIRCEKCY EACPRGVIVP AHIEDGLLGM RSPALKFDAD FCDYCADENG GEPLCVKVCP
TEALALPADA TAENTLLGLA VIDEAQCLAF RDTGCRYCYD ACPYEAIELT GEGANPHVSV
LADKCNGCGA CESVCVSLKA GSIVSGAQER AIVVKPIESA E