Gene Elen_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2045 
Symbol 
ID8416356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2395606 
End bp2396406 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content49% 
IMG OID645025022 
ProductABC-2 type transporter 
Protein accessionYP_003182398 
Protein GI257791792 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGG CAGCGATTCG CATCATGAGT GCACCTATTA CACAGCTGAA GCGCGATTGG 
TTTATCCTGA CATCTCTCGT TGGCAAAGAC TTTAAGCTGA AGTATCGGCG TAGCGTACTC
GGCATACTGT GGTCCGTCCT CAATCCCCTG CTTATGATGA TCGTCCTAAG CGTAGTTTTC
TCCTTTGTTT TCCGTGGGAC CATCGAGCCT TTCCCGGTCT ATCTCATTTT GGGGCAAACT
CTGTTCACCT TCATGTCCGA TGCCACGTCG GGCGCCATGG GATCCATTAT CGACTCTGCG
CCCCTTATCA AGAAGATACG TATCAATAAA ATGCTGTTCC CTTTAGAGAA AGTCATGTTC
GCGTTACTTA ATTTCGCCAT CTCGCTCGTT GCCGTCGCAA TCGTCATGCT CTACTTCCAA
GTAACGCCTA CCCTCAATCT CCTGCTCCTA CCCGTTCTTT TATTCTATCT CTTCATGTTT
TGCTTAGGTC TTGGCCTCTT GCTGTCTTCT CTTGCTGTCT TTTTCCGCGA TGTCATGCAT
CTATGGAGCG TCGTGCTGAC AGCCTGGACC TACGCCACTC CTCTCTTTTA CTCTATCGAA
ATTCTCCCTC CTGAGGTAGC AGGCATCATG CAATTCAACC CGATGTACTA CTACGTTACC
TACTTCCGAG AAATCTTCAT GTACGGCACG ACGCCTGGCC TCATGGAGAA TCTCATCTGC
TTCGGATGCG GCGCAATAGC CCTTGCGATA GGTTTCGCCG TATTTCGCAA GCAACAAAAG
AAATTTATCC TCTACGTGTA G
 
Protein sequence
MGEAAIRIMS APITQLKRDW FILTSLVGKD FKLKYRRSVL GILWSVLNPL LMMIVLSVVF 
SFVFRGTIEP FPVYLILGQT LFTFMSDATS GAMGSIIDSA PLIKKIRINK MLFPLEKVMF
ALLNFAISLV AVAIVMLYFQ VTPTLNLLLL PVLLFYLFMF CLGLGLLLSS LAVFFRDVMH
LWSVVLTAWT YATPLFYSIE ILPPEVAGIM QFNPMYYYVT YFREIFMYGT TPGLMENLIC
FGCGAIALAI GFAVFRKQQK KFILYV