Gene Elen_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2018 
Symbol 
ID8416329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2365348 
End bp2366022 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID645024995 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003182371 
Protein GI257791765 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000432369 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGGCGT TCGCATCGTT CTTCGACCGG TACGGCGCGC TGCTCGCGCA GGGCACGGTG 
GACACGCTCG TCATGACGCT CGTGTCCACG CTGTTCGCCT ACGTCATCGG CATCCCCTTG
GGCGTGGCGC TCGTCGTGAC GGCCCCCGGC GGCCTCAGGC CGAATCGGGT GGTCAACGCG
GTGCTCGGAT GGATCGTCAA CATCGGCCGA TCCATCCCGT TCATCATCCT GCTCGTGGTG
CTCATCCCCG TGACGCGCTG GATCGTGGGC ACGTCGCTCG GCGTGCCGGG CGCCATCGTG
CCGCTCGTGG TGGCGGCCGC GCCCTTCGTC GGGCGCATGG TGGAGCAGAG CCTCGCAGAG
GTCGACGCCG GCCTCGTCGA GGCGGCGCAA AGCTTCGGCG CCGGCGTGCG GCAGATCGTG
GTGAAGGTGT TCCTGCGCGA GAGCCTGCCG TCGCTCGTCA GGGGCGCCTC CATCACCTTC
GTCACGCTGT TCGGCTACGC GGCCATGGCC GGCACGGTGG GCGCCGGCGG TCTGGGCGAC
ATCGCCATCC GCTACGGCTA CCAGCGCTAT CTGGACGACG TCATGATCGC CGCGCTCGTC
ATCTGCGTCA TCATCGTGCA AATCTTCCAG ACCATCGGCA ACGCCGCCGC ACGCGCGGTG
GACAAGCGAA TCTAG
 
Protein sequence
MEAFASFFDR YGALLAQGTV DTLVMTLVST LFAYVIGIPL GVALVVTAPG GLRPNRVVNA 
VLGWIVNIGR SIPFIILLVV LIPVTRWIVG TSLGVPGAIV PLVVAAAPFV GRMVEQSLAE
VDAGLVEAAQ SFGAGVRQIV VKVFLRESLP SLVRGASITF VTLFGYAAMA GTVGAGGLGD
IAIRYGYQRY LDDVMIAALV ICVIIVQIFQ TIGNAAARAV DKRI