| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1623 |
|---|
| Symbol | |
|---|
| ID | 8415922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1922175 |
|---|
| End bp | 1923311 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645024592 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003181980 |
|---|
| Protein GI | 257791374 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0072792 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000117284 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACATTCG GAACCATATT GAGAGAGGCG CGCGAGCGCA AGGGCTACGA TCTCGCGACG
GCTGCGCGAC GGCTGCGCAT CCGACCCGAC ATCCTGCGCG CTATCGAGGA AGACGATTTC
TCCCGCATGC CGCCGCGCGG CTACGCGCGC AACATGGTGA ACGCCTACGC GCGCCTCGTG
GGGCTCAACC CCACCGAGAT GACGCGCATG TACCTGGACG AGGCCTACGC CTACCAGGTG
GGACGCGCGC GCAACGGCGC GCAGCCCTCG GGTTTCGATC GAGGAGGATC TTCGCGCACG
GGACGCTCGA CCTCGCGGCA GGGCGCTCGC CCCTCGCAGC AAGTCGACGA GCGCCCGCCG
CGGCAGAATG CGTTCGGGCG TACGATGTAC GACGACCGGC GCGACTACGG TCGCGATTAC
GGCGCGCGCG GGGGTTCGGA GCGCCTCTAT TCCGAGGGAC GCACGCATCC CAGTCGCCAT
GCGGCGCTGC CGAACGCCGA GTACACGAAC TTCTACGCAG GGCCGAAGGC CTCGAGCGTC
GTGCAGTCGA AGCTGCCTTT CGTCATCGCG GGCGGCGTGA TCCTCGTGCT GCTCATCGTG
GTGCTGGTGC TCGTGTTCGG CAACAACGGC GGGAGCTCGA ACGAGGATGT GACGAAGCTG
CCGGTGACGG GGCTCGCCGA CCCGACGCAG GACGGCAGCG GCACGGAAGG CGGCGAAACC
CCCGCGCAAC CGCAGGCCGA GCCTGTTGAA ACTGCTCCGA CCAGCATCAA GGTGACCTAC
ACGATCGCCA AGGACACCCC GGTGTACGCG GTCATCACGA AGGACGGGAC GTCCGAAGAC
CAGATGTTCT CGGGCGGCGA GGAGGACACC GTTGAGCTGG CCGAGGGCGA CGTGTGGACG
TTCGCCGCTT GGGCGAGCGA CGGCGTGACG ATCAAGGTGG ACGGCGAGGC GGTCAAGTTC
GACGGCTCCG ATCCGGCTAC CGGCATGCCC ATGGCCACGG TCGATTTCGA CGCCTACCTG
GAGAAGTGGT ACGAGGATCA TCCGGATGCC AAGAAGAAGG GGTCGGCCGA CGCGGACGCC
GCCGACAAAG CAGCCGAGGA TGGCGCGAAA ACCGGGGATG GAACATCCGC CGCTTAG
|
|---|
| Protein sequence | MTFGTILREA RERKGYDLAT AARRLRIRPD ILRAIEEDDF SRMPPRGYAR NMVNAYARLV
GLNPTEMTRM YLDEAYAYQV GRARNGAQPS GFDRGGSSRT GRSTSRQGAR PSQQVDERPP
RQNAFGRTMY DDRRDYGRDY GARGGSERLY SEGRTHPSRH AALPNAEYTN FYAGPKASSV
VQSKLPFVIA GGVILVLLIV VLVLVFGNNG GSSNEDVTKL PVTGLADPTQ DGSGTEGGET
PAQPQAEPVE TAPTSIKVTY TIAKDTPVYA VITKDGTSED QMFSGGEEDT VELAEGDVWT
FAAWASDGVT IKVDGEAVKF DGSDPATGMP MATVDFDAYL EKWYEDHPDA KKKGSADADA
ADKAAEDGAK TGDGTSAA
|
|---|
| |