Gene Elen_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1490 
Symbol 
ID8415788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1780710 
End bp1782503 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content60% 
IMG OID645024458 
ProductABC transporter related 
Protein accessionYP_003181847 
Protein GI257791241 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA CAAGCGAACA AGACCGGCAA CGGGATGAAG CGGGGCGGGA GGCTATCAGG 
CGCCTGTCTT GCCCCGTCAA GGGACGCGTC ATGCTGGCGC AGGCGTTCAC GGTGCTCTCG
GCGCTTTTAT CCTTTGCCCC GTATTTGGCT TTGGTATGGC TGGGAGACCT ATTTCTGGCG
GGGGAAGGCC CGCTCGCGCA GGCCGATGCC TCCAAGGTGC ACGAAATTGC CCTCCTCCTC
GTCATGGCGT TCCTCTCGCA GCTGTTCTTT CGCGCTCTTG CGCTCATCAT CACGCATTTT
GCCGATATGA AACTGCGCTA CGTCATTCGC AAGGGTATCG TTGAGCGGTT GAGCCGCGCG
CCTCTTGCTT GGTTTAGCGC TACGGAATCC GGCAAGGTCA GAAGCGCTGT GCAGGATGAC
ACGAAGACGG TCCACACCGT CATCGCACAC GGACCGGTCG ACCGTCTTAA CGGCGTTTTG
CAGCCGATGG TTCTTCTGGC TTTCATGTTC TGGATCAATT GGCGCTTGGC GCTCATCGGC
ATCGCCACGA TCCCCTTCTA TTTCCTGCTG CAGGCGCTCT CTATGAAGGA TATGGGACCG
AAAACCGCCG AGATGAACGG GCACCTTGCA CAAGTGTCCT CGACGATGGT CGAGCTCGTG
TCCGGCATCA AGGTGGTCAA AGCGTTCGGA AAAACAGGAG AGGCGCATCG TAATTACGCG
GACGCCGCAT CGGCATTCTC GCAGTCGTAC TGGGACTGGT GCGCCCCGCT CATCGGGCTT
TGCTCGATTG CCGGCGAGCT CATCTCCTCC CCCTTGCTGC TGCTGATCAA CCTCTGCGGC
GGCGCGCTTG TCATGGGGGC AGGGTTGGCC AGCCTCCCCC AGGTTCTCGC GTGCGCGCTG
ATAGCCATCG TGCTTCCGAC CGCCATCAGC GCTGTCGCCA ACAGCACGTG GTCGTACCAG
ATGGCCGGCG CTGCCGCAGT CAGGCTGTGC GAGATTCTGG ACACGCCGTC GATTCCCGAG
CCGAAAACCC CAAAGAAGCC CGACGGGGTC GTCGTTGAGG TGAACGACGT ATCGTACTCC
TACGGCGATA CCCAGGCCTT GCGCGGTGTC AGTCTTGTCC TTAATCCCGG TACCACGACG
GCGCTCATCG GCCCGTCAGG CTCGGGTAAA TCGACGCTCG CCACACTCAT TGCACGCTTC
GACGACCCGG AAAGCGGCTC CATCCGTCTC GGCGGCGTCG ATCTGAGAGA CATCTCCTCC
CGTGACCTCT ACAACACGGT TTCGTTCGTG CTCCAGGACC CGATGCTGAT CAACGCCTCC
ATCGGAAGAA ACATTTCTTT AGCTAAGCCG GAGGCTTCCC TGGAGGAGAT TCGGGAGGCT
GCCCGTACGG CGCAGATCGA CGATTTCATC ATGTCGCTGC CCAAGGGATA CGACAGCGTT
TTGGGAACGG ACTGCTCGCT CTCAGGCGGC GAGAGCCAGC GCGTGAGTAT AGCGCGTGCC
CTTTTAGCCG ACACGCCGAT CCTCATCATG GATGAGGCCA CCGCTTTTGC CGACCCAGAT
TCGGAGCTCG AGATCCAGAA AGCACTAAGT TCCTTGGTCG AAGGCCGAAC GGTTCTGGCC
ATCGCCCACC GGCTCAACGC AATCCTAGGC GCCGATCAAA TTGCCGTGTT GGAAGAAGGT
AAGATCGTCG CCCTTGGAAC GCATGCGGAG ATTCAAGACA ACGAGCATTA TCAGGCGCTT
CTCAAGCAAG GAGGCCTCTG CGGCAGTGAA GAAGAGGGCG ATGCAGATGA GTAA
 
Protein sequence
MAETSEQDRQ RDEAGREAIR RLSCPVKGRV MLAQAFTVLS ALLSFAPYLA LVWLGDLFLA 
GEGPLAQADA SKVHEIALLL VMAFLSQLFF RALALIITHF ADMKLRYVIR KGIVERLSRA
PLAWFSATES GKVRSAVQDD TKTVHTVIAH GPVDRLNGVL QPMVLLAFMF WINWRLALIG
IATIPFYFLL QALSMKDMGP KTAEMNGHLA QVSSTMVELV SGIKVVKAFG KTGEAHRNYA
DAASAFSQSY WDWCAPLIGL CSIAGELISS PLLLLINLCG GALVMGAGLA SLPQVLACAL
IAIVLPTAIS AVANSTWSYQ MAGAAAVRLC EILDTPSIPE PKTPKKPDGV VVEVNDVSYS
YGDTQALRGV SLVLNPGTTT ALIGPSGSGK STLATLIARF DDPESGSIRL GGVDLRDISS
RDLYNTVSFV LQDPMLINAS IGRNISLAKP EASLEEIREA ARTAQIDDFI MSLPKGYDSV
LGTDCSLSGG ESQRVSIARA LLADTPILIM DEATAFADPD SELEIQKALS SLVEGRTVLA
IAHRLNAILG ADQIAVLEEG KIVALGTHAE IQDNEHYQAL LKQGGLCGSE EEGDADE