Gene Elen_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0411 
Symbol 
ID8414695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp527827 
End bp528417 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content59% 
IMG OID645023386 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003180789 
Protein GI257790183 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.3269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00212654 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGAAC CTAGCACTCG AGACAAGATA GTGAGCGCCA TGTACGCCTT GGTAGCCGAA 
AAAGGCTACG ACAAGGCATC CATGAACCAG GTATGTGCCG CCGTCGGCGT CTCCAAACCG
GCGTTGTACT ACTATTTCGC ATCGAAAGAA GAGCTGTTCT TGGACATGGT GAAAAGCCTG
CATCCGGTGC TCGATCCGGA CGATACGGAA TTCGCCTCGA TCGACGACCG GGGAGAGTAC
TATTCGTATC TGCATGCGAT GGGCCGATCG ATCCTCGCAA GCTACCACGG GGACGAAGAG
CGCCGACGCG TTCTCGCGGA AATCGACATG CAGGCGACGA GAATACCCGC CGTAGCCCAG
CATCAGCAAC GGCTCACGAA GACCACGATC GAAGCGTTCG CCGCCGTTTT GAAGCACGGC
GCGGACATCG GAGCGCTCCC CCCGCGCTTC GATGTCGAGA ACGCGGCGCA ATACCTGTAC
GTCATCACTT CGGGTTTCAG CACGCTCGTG GCGCAGAATG CGGACGTCGA CGCTGTCGCC
GTGTGGAACA AAGCAGTCGA CCTGCTCCTT CTGGACGCGA AGCGGCAATA G
 
Protein sequence
MSEPSTRDKI VSAMYALVAE KGYDKASMNQ VCAAVGVSKP ALYYYFASKE ELFLDMVKSL 
HPVLDPDDTE FASIDDRGEY YSYLHAMGRS ILASYHGDEE RRRVLAEIDM QATRIPAVAQ
HQQRLTKTTI EAFAAVLKHG ADIGALPPRF DVENAAQYLY VITSGFSTLV AQNADVDAVA
VWNKAVDLLL LDAKRQ