Gene EcolC_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3724 
Symbol 
ID6068647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4076898 
End bp4077842 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content49% 
IMG OID641603141 
Productputative transposase YhgA family protein 
Protein accessionYP_001726661 
Protein GI170021707 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT TCACGACCAG CACGCCGCAT GACGCATTAT TTAAATCCTT TCTCATGCAC 
CCTGACACCG CGCGGGATTT TATGGAGATC CACTTACCTA AAGATTTACG TGAACAGTGC
GATCTCGACA GTTTAAAACT GGAATCCGCC AGCTTTGTCG ATGAAAAATT GCGGGCGCTA
CACTCCGATA TTCTGTGGTC GGTAAAGACC CGTGAAGGTG GTGGTTATAT TTACGTAGTG
ATTGAACATC AGAGCCGTGA GGATATTCAT ATGGCCTTTC GCCTGATGCG ATATTCCATG
GCGGTGATGC AGCGCCATAT TGAGCATGAT AAACGCCGGC CGCTACCGCT GGTCATCCCG
ATGCTGTTTT ATCACGGTAG CCGTAGTCCT TATCCCTGGT CCCTGTGCTG GCTGGACGAA
TTTGCCGACC CGACTACCGC ACGGAAGCTT TATACCGCCG CGTTCCCGCT GGTGGATATC
ACTGTCGTGC CAGACGACGT GATTGTGCAG CATCGCAGAG TCGCCCTGTT GGAGTTGATC
CAAAAGCATA TTCGCCAGCG CGATCTGATG GGGCTTATCG ACCAACTGGT AGTATTACTG
GTTACAGAGT GTGCTAATGA CAGCCAGATA ACTGCGCTGT TAAATTACAT TTTACTGACT
GGCGATGAAG CGCGTTTTAA GAAGTTTATC AGCGAACTTA CCCGTCGAAT GCCACAACAC
AGGGAGCGAA TAATGACGAT TGCAGAGCGA ATTTATAATG ATGGATGGCT GTTGGGGATG
GAAAAGGGGA AAGAAGAAGG GGAACAACGC CTCCTTAGAT TGTTGTTGCA GAATGGGGCA
GATCCTGAAT GGATACAAAA GATTACCGGA CTTTCGACAG AGCAAATGCA GGCATTAGAG
CAGCCCTTGC CTGAAATCAA GCGCGATCCA TGGATCGAAT ACTAA
 
Protein sequence
MTNFTTSTPH DALFKSFLMH PDTARDFMEI HLPKDLREQC DLDSLKLESA SFVDEKLRAL 
HSDILWSVKT REGGGYIYVV IEHQSREDIH MAFRLMRYSM AVMQRHIEHD KRRPLPLVIP
MLFYHGSRSP YPWSLCWLDE FADPTTARKL YTAAFPLVDI TVVPDDVIVQ HRRVALLELI
QKHIRQRDLM GLIDQLVVLL VTECANDSQI TALLNYILLT GDEARFKKFI SELTRRMPQH
RERIMTIAER IYNDGWLLGM EKGKEEGEQR LLRLLLQNGA DPEWIQKITG LSTEQMQALE
QPLPEIKRDP WIEY